Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0716 ATGGCTCTGTTACATCCACCCGTGCGCACTGCACCATCTCAGCCTCACCGGTGGCAACAGGCTTGGATGCTGCCTCCTCTCGCCATTTGGATTTGTGTTTCAGCCACCCTCCGTTATGGGTATTACGGGGATTCCCTTATCCTTCTTGGTCCTGGCTCGTCCCGTTTGATTAGAACCAGTTCTGTTTTTGTGAAGCAGCTTCAAGTGGCAAGCAAGGACCAAAATCAAGTCTTTCTTCACGCTTTCAGTAAGAAGCCCGAGTTAAGCTCTCTAACTAATTGGACGGCGTCGGATTTCTTCCTTGTTGAAGCCTATAAAAGCAAGGGGATTTCTTTGTGGTTAAATCAAGGCTCCACCATCCGTATTAGGTGGGAAGAACATACCTCTCGTAGTTTGGATCAGCTACATGGAATGGTGATTAAAGGAGACATGAAGTTTGAACTACCACAGGCTCCACAAACGAGCTTCCTCAATGCAATTTCTCTTCGAGGGACTGTGAATGGTAAAGAAGCTGAATACATGGTTGAGGAAGATGATAGATACCACATTGGGGTTCTAAACATGAATGCAAGGAACATAATCTTGACTATGGAAGTTAATGTTTCAGCAAAGGTATATGATACCACCAAAGCCAAGAAGATGTGCTCCAGTGAAAATGGACCTTGTAGGCTCAGTTTTTCCTTCCCTAATACATATTATGTTATTCTTACGGCAACCAACAATGGAGATGGGGCATCGTATGTTGAAATTTCTTTAGTGGTCCGTGTGTTTGTCTACATATTACTTCTGGGAATTATTGTGATTGCTGTTTATCTGATTCTGAAAGCCCTTGGAGTTTATGATGATGCTGAGCAGCATAGTCATGTTACAGTCGATGTTACGTACGGAACAAGTAATGTAGTTGCAACACAGACCGAAACTGAGCCCTTGATGCGAGTGGAGGCAAATCGAATGTCATATGGAACAAATGCAAAAGATGATGAAGAGAATTCAGTAGCATATAGTAGCTCTTCAGAGGAGTTATATGATGAAAAATTATGTTGCATTTGTTATGATGAACAACGCAGCAGCTTCTTTGTTCCTTGTGGACATTGTGCCACTTGCTATGACTGTGCACAGAGGATTGTCGATGGGGAGAGCAAAGTGTGTCCTATATGCCGAAGGCTTATTCACAAAGTACGAAGATTATTTCACATTTAG 1200 0.4292 MALLHPPVRTAPSQPHRWQQAWMLPPLAIWICVSATLRYGYYGDSLILLGPGSSRLIRTSSVFVKQLQVASKDQNQVFLHAFSKKPELSSLTNWTASDFFLVEAYKSKGISLWLNQGSTIRIRWEEHTSRSLDQLHGMVIKGDMKFELPQAPQTSFLNAISLRGTVNGKEAEYMVEEDDRYHIGVLNMNARNIILTMEVNVSAKVYDTTKAKKMCSSENGPCRLSFSFPNTYYVILTATNNGDGASYVEISLVVRVFVYILLLGIIVIAVYLILKALGVYDDAEQHSHVTVDVTYGTSNVVATQTETEPLMRVEANRMSYGTNAKDDEENSVAYSSSSEELYDEKLCCICYDEQRSSFFVPCGHCATCYDCAQRIVDGESKVCPICRRLIHKVRRLFHI* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0716 399 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 16 398 - -
Pvu9g0716 399 Pfam Domain of unknown function (DUF4792) 79 146 IPR032008 -
Pvu9g0716 399 ProSiteProfiles Zinc finger RING-type profile. 347 387 IPR001841 -
Pvu9g0716 399 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 321 398 IPR013083 -
Pvu9g0716 399 SMART ring_2 347 386 IPR001841 -
Pvu9g0716 399 Pfam Zinc finger, C3HC4 type (RING finger) 344 393 - -
Pvu9g0716 399 PANTHER OS05G0521000 PROTEIN 16 398 IPR044586 GO:0004842
Pvu9g0716 399 Pfam Domain of unknown function (DUF4793) 171 272 IPR032010 -
Pvu9g0716 399 SUPERFAMILY RING/U-box 334 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0716 Pvu-Chr9 11741677 11744529 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0716 - - gmx:100794488 622.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0716 9 11741677 11744529 Pvu9g0716 9 11741677 11744529 ECH