Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0581 ATGCTAGAGGCAATGGAAAGTTCAGTCAATGGTGGCTTCTCCCATTTGCAGAGCTGCGGAGACAGCAGCGAAGAGGAGTTATCGGTGCTGCCACGTCACACCAAAGTGGTGGTAACCGGAAATAACCGTACCAAATCGGTGCTCGTTGGTCTCCAAGGTGTTGTTAAGAAAGCCGTTGGTCTAGGAGGATGGCATTGGCTGGTTCTTACAAATGGTATTGAAGTGAAGTTACAAAGGAATGCTCTCAGTGTGATTGAAGCACCCACGGGTAATGAGGAAGATGATGACCTGGAATTTGAAAATATGCAGTGGAATGGATCTGATATGGCATCGGACGATACACAGAAGTCCCACAAACCGAGGCACAGAATGCATAGAACATTGGGATCATCTCATCACAAGACCATGAGTAGGTCCTTCTCTGGCGATTCACACTCAAAGGGGTCCGTTTCTATGCCTCATGGGTCCGCGGTGGACTTGAGCAAACTTGAAATGGCTGCACTGTGGAGATATTGGCGACATTTTAATCTTGTGGATGCGGTCCCAAACCCATCAAAAGAGCAGCTAGTAGACGTTGTTCAGAGGCATTTCATGTCGCAGCAAATAGACGAGTTGCAAGTGATTATGGGATTTGTACAAGCTGCAAAGAGGCTTAAGACGGTGTGCAAATGA 672 0.4732 MLEAMESSVNGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENMQWNGSDMASDDTQKSHKPRHRMHRTLGSSHHKTMSRSFSGDSHSKGSVSMPHGSAVDLSKLEMAALWRYWRHFNLVDAVPNPSKEQLVDVVQRHFMSQQIDELQVIMGFVQAAKRLKTVCK* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0581 223 MobiDBLite consensus disorder prediction 107 153 - -
Pvu9g0581 223 PANTHER HISTONE DEACETYLASE COMPLEX SUBUNIT SAP30 SIN3-BINDING PROTEIN 1 223 - -
Pvu9g0581 223 Pfam Sin3 binding region of histone deacetylase complex subunit SAP30 163 216 IPR025718 GO:0005515
Pvu9g0581 223 MobiDBLite consensus disorder prediction 133 151 - -
Pvu9g0581 223 Gene3D - 137 223 IPR038291 -
Pvu9g0581 223 PANTHER SAP30 1 223 IPR024145 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0581 Pvu-Chr9 10361151 10364799 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0581 - - gmx:100806535 430.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0581 9 10361151 10364799 Pvu9g0581 9 10361151 10364799 ECH