Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0561 ATGAACAGTGGGAGTAACATTATTCCAAATGGTCTCGTGTCTAGTGAGGTACCATTTGTTGCAAAAGTGCTTAACCAGAAAAGATGGTCACAAGTTGAAGGTAGAACTATAGAGCTGCTTACACATATTCAGCCCAATCTCATATCAGAAGCACATCGAAATGCTGTCGTATCTTACCTTCGATCCCTCATCATGAACACTGTCCCTTGTCAGGTATTTCCATTTGGTTCCGTACCTTCGAAGACGTATTTACCTGATGGAGACATTGATCTAACTGCGTTCTCTGATGATCAACATTCAGAAGACAGCCTCATCCAAGATATACAGCGTATTTTAGAGAGAGAAGAGAAGAATGAGGACGCGCAATTTCAAGTGAAAGAGGTTAAGTATATCCGGGCAAATGTGAATATTATAAAGTGTTTAGTGGAAAACTTTGTAGTTGACATATCTTTCAACCAGATCGGTGGTTTGGGAACACTTTGTTTTATTGAAGAGGTAGACAATTTGATAGATCAGAATCACTTACTGAAGCGAAGTATTATATTGATAAAAGCATGGTGTTTCTATGAGAGCCGCATCCTGGGATCTCACCATGGACTCATTTCAACCTATGCATTGGAAACTTTAGTCATATATTTATTTCATGTTTACAATAATACATTTGCTGGACCACTTGAGGTGCTCTTTCGATTTCTGGATTTCTTCAGCAAATTTGACTGGAGCAAGTATTGCATTAGCTTGCGAGGTCCTGTGCCTATAAGGTCACTTCCCAATATGAAAGCTGAACCTCCACGCAAGGATTGCCGAAAGTTGTTGCTGACCCAACAATTTCTTAATGCTTGTGAATCCAACTATGGCGTTCTGTGTAGCAGCAAAGAATTAAAGGAGAAGCCGTTTGTTTCTAAATACATTAGTATTATAGATCCTTTGCTTGCTAACAACAACATAGGAGGAAGCATTAGAAAAGGAAACTTCAGTAGGATAAAAAGTGCAATTACTTTAGGTGCAAAGCGAATAGAGAGGTTACTGAGTTGCCCAGAAGATAATATAATAGCTGAATTTGATTTATTTTTTAAGAATACATGGGAGAGAAACGGTAATGGTTACTGGATCGATGCAGTCACTTATAAACTTTACCGAAGGAACAAAAATGTTACATCTAGTCGGGAACATTATGGGTCTCATGGTATTTACCAAAATCCTTCTAACCATTCACAAGAATCAAAGCAAATGTTAGGAACCTCTGATGATGAATTTGCTGCTTCTCAAACATGGAGATCAAAGAATGGCAGCATTTTCACTGGTACAATGGCCTTTGATATACAGCATAACAATGCACTTGCTAATACAGGCCAAAGTCCTATATGTTCATCATATGAAGTTCATGACACGCCTTATTCTAGTTCAGAATTTGGTCGTTTGTATAGTGAAGCTTCAATTCATCATTACTACAAGACCAGAATTTCATCTGAAAAATATCAACCTTTTGGGCAGATTTCGTATGAATATGAAGATGGCCCACAAAATACTTCAAGCGATTATTATTGTGAATATGGCTTAGGATTCAATGATGATTATTTCTGTCCTGTTGATGAATCAATGCTGATGCAACAGGAGAACTTTGGTTTTCCTTATTTCAATGAAGATCTGCCACCCCATGTTTTAGCTTCTGGATACATGCATGAAAACTCATCATTTGGGCTGTTTCGAGAAGATGCCCCTTCTTCTGAGTACTTTCCAGGATACAACATGTCTCATTATCACAACACAGCTCCATTTCCATCAGAATGCGTGTCAGTACCTCATTCAGACCATCAAAGAGAAATGGCTATTAACAATGGTTCCAGCTCTGGTAATTCATCTTGGCAGACATGTGCTTCAAGTTACACACAAAAAGATGATTTGGTAACCACTGAGCAAAAATGGTTGGCCAGAGAAAGAAACAGTGAAAATCCACTTGATAGTAGAATCATAAATAAGGATGTGACTTCTCGAGTCGGTGGTGTGAATGAAAACCGGGTTGGTGAATCAACAATAGGCACTGACTTGCGTGAGAACACGACTACTGAAGCTATCAATTCGGATTTTCAAGCTCTCCAATTAGGCAAAAAACTGTCAATGACTGTGCCTAACTCATCAAGTCCTTATTACGCTCCTGCTCTTGTTGGTCCTTCTAGTTCGAGACAGGGAACCGTTGATGACCAACGTTTTCGACCAGCTGCAGATGGTTCCTCTAGACCATCATTTCAAGTTCCTACCATGTTTCCATTCTACAATCTTCCTACTCAGACTGAAACTACTTTTGCAGCTACCAATGATGTGGATTTAGGGTACTTTGTTAATGAAGGTTATGATGTACTGGATAGTGATTTTTTAAGCTATTGGTTGAATCTGCAATATGGAAGGTTTTGCAAGAATCAAATATCAAAGGATGTTTTTCCTCTCTCTTCTACACTGCCAATGCATTTAAGGGCACAATTTGCGGGGCACAGGAAACCTCAGCATGTTCCTGTGATACCATATGGAGATGCTCCTCCCTTGCATGGGGATACTAATGAACGTGTTGGTTTTTGGCTTCCAAGAACTAGTGATGGGACTGGGACTTACTTTCCAAAGCCAAATCCTTCAAGTTATTACCAGTTTCAGCCAAGGTTTTGCAAGAAAAAGCGTCTTCCCCTAAGTCGATACATCGTAAATCCCAAATATAGAAAGAAGGATAACCATAGTGAAAGGGACGAGAATTTGCATTTGAATTCAAGGCAAAGGTTTCCCAGACATGGCCAGTTGTGCGGAAAATTTGAGAAGCCA 2808 0.3935 MNSGSNIIPNGLVSSEVPFVAKVLNQKRWSQVEGRTIELLTHIQPNLISEAHRNAVVSYLRSLIMNTVPCQVFPFGSVPSKTYLPDGDIDLTAFSDDQHSEDSLIQDIQRILEREEKNEDAQFQVKEVKYIRANVNIIKCLVENFVVDISFNQIGGLGTLCFIEEVDNLIDQNHLLKRSIILIKAWCFYESRILGSHHGLISTYALETLVIYLFHVYNNTFAGPLEVLFRFLDFFSKFDWSKYCISLRGPVPIRSLPNMKAEPPRKDCRKLLLTQQFLNACESNYGVLCSSKELKEKPFVSKYISIIDPLLANNNIGGSIRKGNFSRIKSAITLGAKRIERLLSCPEDNIIAEFDLFFKNTWERNGNGYWIDAVTYKLYRRNKNVTSSREHYGSHGIYQNPSNHSQESKQMLGTSDDEFAASQTWRSKNGSIFTGTMAFDIQHNNALANTGQSPICSSYEVHDTPYSSSEFGRLYSEASIHHYYKTRISSEKYQPFGQISYEYEDGPQNTSSDYYCEYGLGFNDDYFCPVDESMLMQQENFGFPYFNEDLPPHVLASGYMHENSSFGLFREDAPSSEYFPGYNMSHYHNTAPFPSECVSVPHSDHQREMAINNGSSSGNSSWQTCASSYTQKDDLVTTEQKWLARERNSENPLDSRIINKDVTSRVGGVNENRVGESTIGTDLRENTTTEAINSDFQALQLGKKLSMTVPNSSSPYYAPALVGPSSSRQGTVDDQRFRPAADGSSRPSFQVPTMFPFYNLPTQTETTFAATNDVDLGYFVNEGYDVLDSDFLSYWLNLQYGRFCKNQISKDVFPLSSTLPMHLRAQFAGHRKPQHVPVIPYGDAPPLHGDTNERVGFWLPRTSDGTGTYFPKPNPSSYYQFQPRFCKKKRLPLSRYIVNPKYRKKDNHSERDENLHLNSRQRFPRHGQLCGKFEKP 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0561 936 SUPERFAMILY PAP/OAS1 substrate-binding domain 175 344 - -
Pvu9g0561 936 CDD NT_PAP_TUTase 52 157 - -
Pvu9g0561 936 Gene3D Beta Polymerase, domain 2 45 155 IPR043519 -
Pvu9g0561 936 MobiDBLite consensus disorder prediction 900 936 - -
Pvu9g0561 936 MobiDBLite consensus disorder prediction 390 409 - -
Pvu9g0561 936 Pfam Nucleotidyltransferase domain 71 126 IPR002934 GO:0016779
Pvu9g0561 936 SUPERFAMILY Nucleotidyltransferase 42 193 IPR043519 -
Pvu9g0561 936 PANTHER NUCLEOTIDYLTRANSFERASE 5 924 - -
Pvu9g0561 936 MobiDBLite consensus disorder prediction 900 920 - -
Pvu9g0561 936 Gene3D - 156 353 - -
Pvu9g0561 936 MobiDBLite consensus disorder prediction 719 733 - -
Pvu9g0561 936 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 5 924 - -
Pvu9g0561 936 MobiDBLite consensus disorder prediction 719 748 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0561 Pvu-Chr9 10114541 10120532 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0561 - - pvu:PHAVU_009G054300g 1928.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0561 9 10114541 10120532 Pvu9g0561 9 10114541 10120532 ECH