Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0530 ATGAAAGGTTCATGTCTTCTTCCTTCGCACTCTTTCACCGGAATCAGGACAAGCAAAGAGCTTCCGCATATGCTATCTTTGTGTGAGTTGAAAAGCATAGCATGCTTCTCGGTTTGTAATCAAAGGCAAAATTACAATCAAAAGCTTTACATTATTCCCATTAGGACTGCTTCTGTTCGGGTCCGCATCGCAAGATCTTCAGTTGGGTCATTGGAATGTGATGGGACAGGCCCACATAGTGATGCTTATTCAGGATTTTCAGCTCCAAATGACCATCAGAGAATTGGCAGTTTAGAAAGAGAATTGGAAGAGTTATTTGATGAAGTGAAGAGAATGATTAGGATGGGAAACAAAAATGATGCTATAGACCTGCTAACTGCTAATTACGAAGCCGTCAAAGAGAGCCTGAATGCAGGTACTAAAGGCATAGAAGAAGCTGCAATTTTGGATGTCATAGCACTAGGTTACATGGCAGTTGGAGACTTAAAATTTGTTGGATCTTTGTTGGATATGATGAAAGAAGTTGTTGACAATTTGAAGGATGATGCACCTCGTCTGGATTCAATACTTATGCATATGGGAAGTATGTACGCAACATTGAACATGTTTGAAAAATCATTGGACACATATCAGAGGGCTCTCTACATTATGGAGGGGACCTACGGTAAGGATAGTACTTTACTTGTCACGCCTTGTTTGGGTATGGCAAAAGTTCTTGGCTCTTTCGGAAAAGCAACAAAAGCCATAGAGATTTACCAGCGTGTGATCACTCTTTTGGGATCAAGTAGAGGTGCCCAAAGTAAGGATTTGGTTGTACCTTTACTTAGCCTTGGCAATCTTTTACTCAAAGAAAGGAGAGCCAATGACGCTGAAACTCATTTTACTAGAGTTCTCGACATATACACTAAATTATATGGACAAAATGATGGAAGAATTGGGATAGCTATGAGTTCCCTAGCCCGAGTTAAGAGTGCTCAAGGGAAATCAGATGAAGCAATACAATTGTTTAAACGTGCTATTCAGGTCATGAAGGATTCAAATTACTTGTCACCAGATGACAGTATAATGGAAAAGATGAGGGTGGATCTATCTGAATTACTTCATGCCGCTGGGAGAGGACAAGAAGGCAGAGAGCTATTAGAGGAGTGTTTGTGGATCACTGAGAGGCACAAAGGAAAGGAGCACCCCATCCTGGTGACGCACATGATAAATCTTGCAACTTCGTATTCACGGTCAAAGAATTATGCAGATGCCGAGCACCTGTTGAGAAGAAGTTTGCAAATCATGATAAAGCATAAGGGAACTGATGACCAGTCCATCAGCTTTCCTATGTTACATCTTGCAGTTACACTCTACCATTTGAAAAAGGATGAAGAAGCAGAGAAACTTGCACTGGAGGTTTTGCGGATCCGTGAGAAGGCCTTTGGAAAAAATTCCCTTCCTGTTGGGGAGGCGTTGGATTGTTTGGTGTCTATTCAAACCAGACTTGGTAAGGATGACAGTGAGTTGCTCGAGCTGCTTAGAAGGATCTTGAGTATCCAAGAAAGAGAATTTGGATATGAAAGTGAGGAGGTTTTGGTTAGCCTGAAAAAAATTGTATACTACTTGGATAAACTAGGGAAGAAAGATGAAAAGCTTACCCTTCATAGAAGATTGTCTGTGCTTAGGAAAAAGTATAATCAGATCGTTAACTACTAA 1698 0.4081 MKGSCLLPSHSFTGIRTSKELPHMLSLCELKSIACFSVCNQRQNYNQKLYIIPIRTASVRVRIARSSVGSLECDGTGPHSDAYSGFSAPNDHQRIGSLERELEELFDEVKRMIRMGNKNDAIDLLTANYEAVKESLNAGTKGIEEAAILDVIALGYMAVGDLKFVGSLLDMMKEVVDNLKDDAPRLDSILMHMGSMYATLNMFEKSLDTYQRALYIMEGTYGKDSTLLVTPCLGMAKVLGSFGKATKAIEIYQRVITLLGSSRGAQSKDLVVPLLSLGNLLLKERRANDAETHFTRVLDIYTKLYGQNDGRIGIAMSSLARVKSAQGKSDEAIQLFKRAIQVMKDSNYLSPDDSIMEKMRVDLSELLHAAGRGQEGRELLEECLWITERHKGKEHPILVTHMINLATSYSRSKNYADAEHLLRRSLQIMIKHKGTDDQSISFPMLHLAVTLYHLKKDEEAEKLALEVLRIREKAFGKNSLPVGEALDCLVSIQTRLGKDDSELLELLRRILSIQEREFGYESEEVLVSLKKIVYYLDKLGKKDEKLTLHRRLSVLRKKYNQIVNY* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0530 565 Coils Coil 95 115 - -
Pvu9g0530 565 ProSiteProfiles TPR repeat profile. 313 346 IPR019734 GO:0005515
Pvu9g0530 565 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870) 100 551 - -
Pvu9g0530 565 Gene3D Tetratricopeptide repeat domain 91 356 IPR011990 GO:0005515
Pvu9g0530 565 SUPERFAMILY TPR-like 189 428 IPR011990 GO:0005515
Pvu9g0530 565 SUPERFAMILY TPR-like 362 497 IPR011990 GO:0005515
Pvu9g0530 565 Gene3D Tetratricopeptide repeat domain 357 563 IPR011990 GO:0005515
Pvu9g0530 565 SMART tpr_5 187 220 IPR019734 GO:0005515
Pvu9g0530 565 SMART tpr_5 441 474 IPR019734 GO:0005515
Pvu9g0530 565 SMART tpr_5 229 262 IPR019734 GO:0005515
Pvu9g0530 565 SMART tpr_5 271 304 IPR019734 GO:0005515
Pvu9g0530 565 SMART tpr_5 313 346 IPR019734 GO:0005515
Pvu9g0530 565 SMART tpr_5 399 432 IPR019734 GO:0005515
Pvu9g0530 565 ProSiteProfiles TPR repeat profile. 187 220 IPR019734 GO:0005515
Pvu9g0530 565 Pfam MalT-like TPR region 188 468 IPR041617 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0530 - - gmx:100805230 944.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0530 9 9644650 9648905 Pvu9g0530 9 9644650 9648905 ECH