Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0527 ATGGAACGTTCTAGATCTAAGAGGAACTACTACTATGAACAAGACTATGATTCTGAGACTGTGGCCAGGACCAGGCCGCGCTATAATCACCACTACAGCGCCGGCGCCGGGAACCACCGCCACCGTGGCGGAGGCGCCCGCCACGCAAAGGCGCAGGACTCGCAACTAAGCGTCACAACCAGCTACCGCATTCTGTGCCACGACATGAAGGCTGGCGGCGTGATAGGAAAGTCCGGCAGCATTATAAAGTCCATAAGGCAGCACACCGGCGCGTGGATCAACGTGCACGAGCTCATGCCGGGGGATGAGGAGCGGATCATCGAGATTTCGGACACTCGACGGCGAGACCCCGAGGGGAGAATGCCGTCATTCTCGCCGGCGCAGGAGGCGCTGCTGCTGATCCACGAGCGGATTCTGGAGAGCGACGCGGCGTTCGGGGTGGTGGAGGAGGATGAAGAGTACGGCGGGAGGGGTGGAGGCGGTGGGAGGGACCGGGTGGCGACGAGGCTGGTGGTATCGAGAATGCATGTTGGGTGTTTGTTGGGTAAAGGAGGGAAGATTATTGAACAAATGAGGATGGAAACCAAGACGCAGATTAGGATACTCCCTAGAGATCACAACCTTCCCCGTTGTGTTTCCATGTCTGAAGAGATTGTTCAGGTTGTTGGTGATGTAAGTGCTGTAAAGGATGCTATAGCTAATATATCATCACGGTTGAGGGAGAGCCAGCACCGCGACCGAAGTCATTTCCATGGGCGTATACATTCACCAGAGCGATTTTTCTCTCCCGACAATGATTATATTCCTCATGTGACTGGTGGATCTCGTAGATCATCTGTGGATGGGGCCGCTTTTGGATCACGAGGTTCTAACACAACTAGCAGAAACAATAACCACTCTGCAATGAATTATTTGATGGAGCCTGGGGCTGCTCCTGTTTCTGATGATGTGCATGGCTTTTATGGGGAGGAACTGGTTTTCCGTGTACTCTGTCCAGTTGAGAGAGTTGATCGTATAATTGGGGAATCAGGTGGAATTGTAGAGTTCCTTCAGAATGAGGTTGGTGTAGATGTTAAGGTCACTGATCCTGTTGGTGGTTCGGATGAACAAATAGTTATCATTACTTCAGAGGAGGGTCCTGATGATGAGCTGTTCCCAGCTCAAGAAGCTTTGTTACATATACAAACCCGCATTGTCGATCTTATTCTAGAGAAAGACAATACTATAACCACCAGACTTGTTGTCCCATCCAGCGAAATTGAATGCTTAGACGGAAAGGATGCTTCACTTTCAGAAATAAGGAGGTTGACTGGTGCTAATATTCAAATTTTGCCTAGAGATGAGCTACCTCCCTGTGTTGCAAAAACCGATGAACTTGTACAGATTGTAGGAGAGATTAAAGCGGCCCGAGATGCTGTTGTGGAGGTGACATCAAGATTAAGAAGTTACTTGTATAGGGATTTCTTTCAAAGGGACATAGTACCACCAGTTGCCTTGCCTGGTGTGGAGGCATCTTCTTCCAATAATTTAGTTCCAGTTATTGAAACACTCACGACCTATCAAAATATGCAAACTGTTGCAGCAGCCTTTCCATCAAAGGAACCTGGAGGAACTAGCACTGAGATAGGAAAGCAGAAAGAAAGTGATCGCCGTGATGACGTGCTTAGTGGTTTGAATAGGATTGCTGTGCCTCTTGTCACAAGGAGTACACTTGAAGTTGTTATACCAGAGTATGCAGTACCAAAGCTTATAGCAAAATCCAAAAGCAAGCTTGCCCAAATAAGTGAGTTATCAGGAGCCAATGTAACACTAGTAGAGGATAGACCAGACGTGACACAGAAGATTATTCAGATATCTGGAACTCCAGAGCAGGCAGAGAGAGCCCAGAGCTTGCTCCAAGGATTTATTTTGAGCACACAAGAAGACGGTCCTTAA 1935 0.4848 MERSRSKRNYYYEQDYDSETVARTRPRYNHHYSAGAGNHRHRGGGARHAKAQDSQLSVTTSYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELMPGDEERIIEISDTRRRDPEGRMPSFSPAQEALLLIHERILESDAAFGVVEEDEEYGGRGGGGGRDRVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCVSMSEEIVQVVGDVSAVKDAIANISSRLRESQHRDRSHFHGRIHSPERFFSPDNDYIPHVTGGSRRSSVDGAAFGSRGSNTTSRNNNHSAMNYLMEPGAAPVSDDVHGFYGEELVFRVLCPVERVDRIIGESGGIVEFLQNEVGVDVKVTDPVGGSDEQIVIITSEEGPDDELFPAQEALLHIQTRIVDLILEKDNTITTRLVVPSSEIECLDGKDASLSEIRRLTGANIQILPRDELPPCVAKTDELVQIVGEIKAARDAVVEVTSRLRSYLYRDFFQRDIVPPVALPGVEASSSNNLVPVIETLTTYQNMQTVAAAFPSKEPGGTSTEIGKQKESDRRDDVLSGLNRIAVPLVTRSTLEVVIPEYAVPKLIAKSKSKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILSTQEDGP* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0527 644 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 401 489 IPR036612 GO:0003723
Pvu9g0527 644 ProSiteProfiles Type-1 KH domain profile. 59 131 - -
Pvu9g0527 644 ProSiteProfiles Type-1 KH domain profile. 165 235 - -
Pvu9g0527 644 ProSiteProfiles Type-1 KH domain profile. 568 632 - -
Pvu9g0527 644 CDD PCBP_like_KH 169 236 - -
Pvu9g0527 644 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 316 381 IPR036612 GO:0003723
Pvu9g0527 644 CDD KH-I 570 633 - -
Pvu9g0527 644 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 3 529 - -
Pvu9g0527 644 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 56 110 IPR036612 GO:0003723
Pvu9g0527 644 PANTHER RNA-BINDING KH DOMAIN-CONTAINING PROTEIN RCF3 3 529 - -
Pvu9g0527 644 ProSiteProfiles Type-1 KH domain profile. 324 391 - -
Pvu9g0527 644 CDD PCBP_like_KH 61 135 - -
Pvu9g0527 644 Pfam KH domain 410 475 IPR004088 GO:0003723
Pvu9g0527 644 Pfam KH domain 62 110 IPR004088 GO:0003723
Pvu9g0527 644 Pfam KH domain 168 236 IPR004088 GO:0003723
Pvu9g0527 644 Pfam KH domain 570 633 IPR004088 GO:0003723
Pvu9g0527 644 Pfam KH domain 327 379 IPR004088 GO:0003723
Pvu9g0527 644 Gene3D - 323 484 - -
Pvu9g0527 644 Gene3D K Homology domain, type 1 567 639 IPR036612 GO:0003723
Pvu9g0527 644 SMART kh_6 58 139 IPR004087 GO:0003676
Pvu9g0527 644 SMART kh_6 407 481 IPR004087 GO:0003676
Pvu9g0527 644 SMART kh_6 164 240 IPR004087 GO:0003676
Pvu9g0527 644 SMART kh_6 567 637 IPR004087 GO:0003676
Pvu9g0527 644 SMART kh_6 323 396 IPR004087 GO:0003676
Pvu9g0527 644 Gene3D K Homology domain, type 1 163 244 IPR036612 GO:0003723
Pvu9g0527 644 MobiDBLite consensus disorder prediction 532 551 - -
Pvu9g0527 644 MobiDBLite consensus disorder prediction 34 53 - -
Pvu9g0527 644 MobiDBLite consensus disorder prediction 273 297 - -
Pvu9g0527 644 Gene3D K Homology domain, type 1 58 141 IPR036612 GO:0003723
Pvu9g0527 644 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 560 638 IPR036612 GO:0003723
Pvu9g0527 644 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 161 246 IPR036612 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0527 Pvu-Chr9 9607418 9613104 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0527 K21444 - gmx:100804167 1100.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0527 9 9607418 9613104 Pvu9g0527 9 9607418 9613104 ECH