Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0468 ATGCTGTCAGTCTCACTCTCACTCCACGCACTATCATCCCCTTCAGTCACCAAAAATCCTCCATCTTCATTTCATTTCCCTTCATTCACTCTCTTTTCAATGGCCACTCTCTCTAGTTTCCACACCACCCTTCGCCCCTCTTGCTATCTCCCCTCATCACCCTCCTCACCTAATCTGCTACTACCTCCACCCCTCTTCTCCAAAACCCCTTCCACAACTTTCTTGGGCCACACTGAACGCCTCCTCAAATATGCTGCCACTTCCACAACCAACCGTGCGCGTTCTCTCTCTGCTCGCATGTCATGGGACGGTCCTCTCTCTTCCGTCAAATTGATCATTCAGGGTAAAAATCTCGAGCTCACTGATCCTGTGAAGCAGCATGTGGAAGATAAGGTGGGAAAGGCGGTTCAGAAGCATACTCACCTAGTGAGAGAGGTTGATGTGAGGCTTTCTATTAGAGGAGGAGGTGAATTTGGGCGAGGACCCAGAACTCGTAGGTGTGAGGTGACTTTGTTCACTAAGAGGCACGGAGTGTTACGGGCCGAGGAGGACGCTGAAAGCACCTATGGAAGTATAGATTTGGTATCATCAATCATTCAGAGAAAGTTGAGGAAAATAAAGGAAAAGGAGTCTGATCATGGTCGCCACATGAAGGGTTTCAATAGGTTGAAGGTTAGGGAGCCAGTGGAGCAACTACCTGTCCAAGAGGATGAAATATTATCTCCAGAGGAGGAGGAAGAATCAATTGAAGAGGTTGTTCGTACAAAGTACTTTGACATGCCACCCTTGACTGTGTCTGAAGCAATAGAGCAACTTGTAAATGTTGATCATGACTTTTATGGTTTTCGGAACGAAGAAACTGGGGAAGTTAATATTGTGTATAAAAGAAAAGAAGGTGGATATGGACTCATTATACCCAAAGGTGACGGTGAAGCAGAGAAATTGGAGCCTGTTGTGCTTGAACCGGCTGTAGAACCCTCCCTGAAAGAATGA 993 0.4663 MLSVSLSLHALSSPSVTKNPPSSFHFPSFTLFSMATLSSFHTTLRPSCYLPSSPSSPNLLLPPPLFSKTPSTTFLGHTERLLKYAATSTTNRARSLSARMSWDGPLSSVKLIIQGKNLELTDPVKQHVEDKVGKAVQKHTHLVREVDVRLSIRGGGEFGRGPRTRRCEVTLFTKRHGVLRAEEDAESTYGSIDLVSSIIQRKLRKIKEKESDHGRHMKGFNRLKVREPVEQLPVQEDEILSPEEEEESIEEVVRTKYFDMPPLTVSEAIEQLVNVDHDFYGFRNEETGEVNIVYKRKEGGYGLIIPKGDGEAEKLEPVVLEPAVEPSLKE* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0468 330 Gene3D - 262 311 IPR038416 -
Pvu9g0468 330 Hamap Ribosome hibernation promoting factor [hpf]. 109 307 IPR034694 -
Pvu9g0468 330 TIGRFAM yfiA: ribosomal subunit interface protein 110 214 IPR003489 GO:0044238
Pvu9g0468 330 Pfam Sigma 54 modulation protein / S30EA ribosomal protein 112 209 IPR003489 GO:0044238
Pvu9g0468 330 Pfam Sigma 54 modulation/S30EA ribosomal protein C terminus 250 303 IPR032528 -
Pvu9g0468 330 Gene3D - 110 214 IPR036567 -
Pvu9g0468 330 PANTHER 30S RIBOSOMAL PROTEIN 94 310 - -
Pvu9g0468 330 SUPERFAMILY Ribosome binding protein Y (YfiA homologue) 110 216 IPR036567 -
Pvu9g0468 330 CDD RaiA 110 209 IPR003489 GO:0044238
Pvu9g0468 330 PANTHER 30S RIBOSOMAL PROTEIN 94 310 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0468 - - gmx:100803327 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0468 9 8727257 8729478 Pvu9g0468 9 8727257 8729478 ECH