Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0406 ATGAATGCGTATTTGATCGCAGCCATTTCTCTGTTGGGCGTGTTTCTGTCATCATCGACCGTGTTCGGGTACGAGGAGGATGAAGTGTATGCCAAAGAGATTCTGGACGCAGCACAGAAGGAGAAGGAATGGTTGGTTTCGGTGAGAAGGCAAATCCATGAACACCCAGAACTGGCTTTCCAAGAACACAACACCAGTTCTCTTATACGCGCACAACTTCACAAGCTTGGTATACCATACACATACCCAGTTGCCAAAACCGGCGTCGTTGCACAACTTGGCTCGGGCTCTCGCCCCATCATTGCTATTCGTGCTGATATGGATGCACTCCCCATGCAGGAGCTTGTTGAGTGGGAACACAAGAGCAAAATTGACGGCAGAATGCATGCGTGTGGACATGATGCTCACACCACCATGCTACTTGGGGCTGCAAAGTTGCTCAGCCAGCGCCAAGATAAGCTTCAGGGAACTGTAAGACTTATTTTCCAACCTGCTGAGGAAGGAGCCAGGGGTGCCTCTCAAATGATAAAGGAAGGAGTGCTTCAAGATGCAGAAGCAATTTTTTCATTACATATTGATGCTACAACACCTACTGGAGCCATAGCATCCATTCCAGGTGCATTTACTGCAGCTGGATGCGTGTTTGAGGCAAGGATGGTAGGAGTAGGTGGTCATGCTGCATCACCCCACACGAATGTAGATCCAGTGCTGGCCACATCATTTGCAATTTTGGCACTGCAACAGCTCGTTTCAAGAGAAACTGATCCTCTTCAAAGTCTAGCGCTATCAGTTACTTTTGTCAAAGGGGGAACTGCATTAAACGTGATTCCCTCGTATGTAAAATTTGGAGGCACACTTAGGAGCCAGACAACTGAAGGCATGTACCATTTCAGACAGCGATTAAAGGAGGTTATTGAAGGACAGGCAGTTGTGCACAGATGCAATGCTTATGTTGATTTCAAAGAAGAGTACTACACCCCATATCCTGCTGTTGTTAATGACAATTATCTGCATCTGCATGTGGTAAGAGTTGGGCAACTTCTGCTTGGTCCAGACAATGTGCATGAAGCCAAGAAGGTGCTGGCAGGTGAGGACTTTGCATATTTTCAACAAGTCATTCCCGGAGCATTGTTTTCCATTGGAATCAGAAATGATAAAGTGGGAGCAATTCACTCCCCACATTCCCCTTTCTTCTTTCTGGATGAGGAGGTTCTGCCAATAGGGACAGCTCTGCACACTGCTCTTGCTGAGTTGTATTTAAAAGAGCATAACCATACTGTTCAATGA 1287 0.4662 MNAYLIAAISLLGVFLSSSTVFGYEEDEVYAKEILDAAQKEKEWLVSVRRQIHEHPELAFQEHNTSSLIRAQLHKLGIPYTYPVAKTGVVAQLGSGSRPIIAIRADMDALPMQELVEWEHKSKIDGRMHACGHDAHTTMLLGAAKLLSQRQDKLQGTVRLIFQPAEEGARGASQMIKEGVLQDAEAIFSLHIDATTPTGAIASIPGAFTAAGCVFEARMVGVGGHAASPHTNVDPVLATSFAILALQQLVSRETDPLQSLALSVTFVKGGTALNVIPSYVKFGGTLRSQTTEGMYHFRQRLKEVIEGQAVVHRCNAYVDFKEEYYTPYPAVVNDNYLHLHVVRVGQLLLGPDNVHEAKKVLAGEDFAYFQQVIPGALFSIGIRNDKVGAIHSPHSPFFFLDEEVLPIGTALHTALAELYLKEHNHTVQ* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0406 428 PANTHER PEPTIDASE M20 FAMILY MEMBER 6 426 IPR017439 GO:0016787
Pvu9g0406 428 PANTHER IAA-AMINO ACID HYDROLASE ILR1-LIKE 3 6 426 - -
Pvu9g0406 428 Pfam Peptidase dimerisation domain 216 308 IPR011650 -
Pvu9g0406 428 PIRSF Amidohydrol_AmhX 30 424 IPR017439 GO:0016787
Pvu9g0406 428 TIGRFAM amidohydrolases: amidohydrolase 45 408 IPR017439 GO:0016787
Pvu9g0406 428 CDD M20_IAA_Hyd 45 420 IPR044757 GO:0009850|GO:0016787
Pvu9g0406 428 Gene3D Zn peptidases 46 405 - -
Pvu9g0406 428 SUPERFAMILY Bacterial exopeptidase dimerisation domain 210 329 IPR036264 -
Pvu9g0406 428 Gene3D - 210 328 - -
Pvu9g0406 428 Pfam Peptidase family M20/M25/M40 102 416 IPR002933 GO:0016787
Pvu9g0406 428 SUPERFAMILY Zn-dependent exopeptidases 32 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0406 Pvu-Chr9 7995071 7999435 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0406 K14664 - gmx:100777587 740.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0406 9 7995071 7999435 Pvu9g0406 9 7995071 7999435 ECH