Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0401 ATGTCTCCGGGACCCGTTGTTGATGCCGCCGCCGATACCGGAGCCGAGCCACAAGTTCTCTCCGTCGACGATGCAGCCCTGAAGAAGAAACCTCAACCCCAGGAAGATGATGCTCCCATCGTAGAGGACGTCAAGGACGATGAAAAAGACGAAACCGAAGACGAGGATGAGGATGAGGACGATGACAAAGATGACGCCCAAGGTGGTACTGAGGGTTCGAAGCAGAGCAGAAGTGAGAAGAAGAGCCGAAAAGCAATGTTGAAGCTGGGACTGAAACCTGTTACTGGTGTTAGTAGGGTCACTATCAAGAGGACAAAGAATGTTCTTTTTTTCATCTCAAAACCTGATGTCTTCAAGAGTCCAAATTCTGAGACCTATGTCATATTTGGGGAGGCAAAAATAGAGGACTTGAGCTCTCAGTTGCAGACACAGGCTGCTCAGCAGTTCAGGATGCCAGATGTGGGATCTGTGCTGGCAAAACAAGATCAAGATGCTGCAGCTGCAGTGGCACAGCCTGAAGAAGAGGAGGAGGTTGATGAAACTGGTGTCGAGCCGCATGACATTGATTTGGTGATGACCCAGGCAGGAGTTTCTAGAAGCAAGGCTGTCAAGGCCCTCAAGACTCACGACGGAGACATTGTTGGTGCTATCATGGAGCTCACTACTTAG 669 0.5007 MSPGPVVDAAADTGAEPQVLSVDDAALKKKPQPQEDDAPIVEDVKDDEKDETEDEDEDEDDDKDDAQGGTEGSKQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNVLFFISKPDVFKSPNSETYVIFGEAKIEDLSSQLQTQAAQQFRMPDVGSVLAKQDQDAAAAVAQPEEEEEVDETGVEPHDIDLVMTQAGVSRSKAVKALKTHDGDIVGAIMELTT* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0401 222 MobiDBLite consensus disorder prediction 40 66 - -
Pvu9g0401 222 Gene3D - 85 138 IPR038187 -
Pvu9g0401 222 MobiDBLite consensus disorder prediction 67 85 - -
Pvu9g0401 222 Pfam NAC domain 79 134 IPR002715 -
Pvu9g0401 222 Gene3D - 183 220 - -
Pvu9g0401 222 MobiDBLite consensus disorder prediction 1 85 - -
Pvu9g0401 222 ProSiteProfiles NAC A/B domain profile. 76 141 IPR002715 -
Pvu9g0401 222 SMART NAC_2 79 135 IPR002715 -
Pvu9g0401 222 PANTHER NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED 27 221 IPR016641 GO:0005854
Pvu9g0401 222 Pfam HYPK UBA domain 182 221 IPR044034 -
Pvu9g0401 222 CDD UBA_NAC_euk 185 221 - -
Pvu9g0401 222 PANTHER NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 2 27 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0401 Pvu-Chr9 7934549 7936274 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0401 K03626 - gmx:100499943 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0401 9 7934549 7936274 Pvu9g0401 9 7934549 7936274 ECH