Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0392 ATGCGTTCATTGGTCCCCAAAGGAAGAATCAACAGAAGGAGCATGACATGTCGATGCCTTACCAATTCACTCACTCAAACCCATAACCCCTTCGCTTCTTCTCTCCACAATAACCGCAACCCTCTCTTTCAGTTTTTCTCTGGTATTCTCCGACCCTCTTTTCGCCCGTTTTCCACCAACTTTAGGGGCGCGCCTACACCTGCTGCTTCTTCTTCTTCTGCATTAATGGCCAATCTCCATGCTGATTCCGTCACTTACCTCACGCAGCGAGAAGCCGCAGAGATCGACGAGACGCTCATGGGTCCTCTCGGCTTCAGCGTCGACCAGCTCATGGAATTGGCTGGTTTGAGCGTTGCTGCTTCAATTTCTGAGGTTTACAAACCCAGTGAGCATAGTCGTGTTCTTACTATATGTGGCCCTGGTAACAATGGTGGTGACGGTCTGGTAGCTGCTCGCCACCTGCATCACTTTGGTTATAAGCCATTTGTGTGCTACCCAAAGCGTACCCCCAAGCCTCTCTATGCTGGATTAGTTACTCAGCTTGAAGCACTGTCGATCCCATTCTTGTCAGTGGAAGAACTACCGTCAGATCTTTCAAATGACTTTGACATTCTTGTAGATGCGATGTTTGGATTCTCATTTCATGGTTCTCCCAGGCCTCCTTTTGATGATTTGATCCAGAGACTTGTCTCTTTGCATGATAATAATCAAATTGGCCAAAAAAGATCAGTTATAGTGTCTGTAGATATTCCCTCTGGGTGGCATGTTGAAGAGGGAGATGTTGATGGTGCAGGCATTAAGCCTGATATGTTGGTTTCTTTGACAGCCCCAAAATTAGGTGCAAAGAAGTTCGGTGGTCCTCACCACTTTCTAGGAGGTAGATTTGTTCCACCTGCTATTGCAGAAAAATACAAGCTTGTACTTCCACCTTATCCTGGAACATCCATGTGTGTTCGAATTGGAAAGCCTCCACAAATTGATATCTCTGCTCTAAGAGAGAATTATATCTCACCAGAATTTCTTGAAGAGCAGGTGGAGGCCAACCCTATTAATCAGTTTCGCAAATGGTTTGATGATGCAATGGCTGCTGGTTTGAAGGAACCAAATGCCATGGCCTTGTCAACTGTGGGGGAGGATGGAAAACCCTCATCACGAATGGTATTGCTAAAAGGCTTGGATAAGGATGGATTTGTGTGGTACACAAACTATGAAAGTCGAAAGGCACGTGAATTATCTGAAAATCCTCAAGCATCGCTGCTTTTTTACTGGGATGGTTTAAACCGGCAGGTGCGGGTAGAAGGACCTGTTCAGAAAGTATCTGATGAGGAATCAGAACAATATTTCCATAGCCGTCCTAGAGGAAGTCAGATTGGAGCAATAGTCAGCAAGCAGAGTACTGTAGTACCTGGTAGGCATGTTCTCTATCAGGAGTACAAAGAACTGGAACAAAAATACGCTGATGGAAGTTTGATCCCCAAACCTAACTGGGGAGGATATAGACTCACACCACAACTTTTTGAGTTTTGGCAAGGACAGAAATCTCGCTTGCATGACAGGTTGCAATATACTCCCCATGAGATCAATGGACAGCGGCTGTGGAAGGTTGAACGGTTGGCTCCCTGA 1623 0.4578 MRSLVPKGRINRRSMTCRCLTNSLTQTHNPFASSLHNNRNPLFQFFSGILRPSFRPFSTNFRGAPTPAASSSSALMANLHADSVTYLTQREAAEIDETLMGPLGFSVDQLMELAGLSVAASISEVYKPSEHSRVLTICGPGNNGGDGLVAARHLHHFGYKPFVCYPKRTPKPLYAGLVTQLEALSIPFLSVEELPSDLSNDFDILVDAMFGFSFHGSPRPPFDDLIQRLVSLHDNNQIGQKRSVIVSVDIPSGWHVEEGDVDGAGIKPDMLVSLTAPKLGAKKFGGPHHFLGGRFVPPAIAEKYKLVLPPYPGTSMCVRIGKPPQIDISALRENYISPEFLEEQVEANPINQFRKWFDDAMAAGLKEPNAMALSTVGEDGKPSSRMVLLKGLDKDGFVWYTNYESRKARELSENPQASLLFYWDGLNRQVRVEGPVQKVSDEESEQYFHSRPRGSQIGAIVSKQSTVVPGRHVLYQEYKELEQKYADGSLIPKPNWGGYRLTPQLFEFWQGQKSRLHDRLQYTPHEINGQRLWKVERLAP* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0392 540 Pfam Pyridoxamine 5'-phosphate oxidase 357 443 IPR011576 -
Pvu9g0392 540 Pfam YjeF-related protein N-terminus 108 280 IPR004443 -
Pvu9g0392 540 ProSitePatterns Pyridoxamine 5'-phosphate oxidase signature. 506 519 IPR019740 GO:0016638
Pvu9g0392 540 PANTHER NAD(P)H-HYDRATE EPIMERASE 81 525 - -
Pvu9g0392 540 Hamap NAD(P)H-hydrate epimerase [nnrE]. 88 323 IPR004443 -
Pvu9g0392 540 TIGRFAM pdxH: pyridoxamine 5'-phosphate oxidase 324 540 IPR000659 GO:0004733|GO:0008615|GO:0010181
Pvu9g0392 540 SUPERFAMILY FMN-binding split barrel 342 540 - -
Pvu9g0392 540 Gene3D - 339 540 IPR012349 -
Pvu9g0392 540 Hamap Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 334 540 IPR000659 GO:0004733|GO:0008615|GO:0010181
Pvu9g0392 540 ProSiteProfiles YjeF N-terminal domain profile. 92 308 IPR004443 -
Pvu9g0392 540 SUPERFAMILY YjeF N-terminal domain-like 85 315 IPR036652 -
Pvu9g0392 540 Gene3D - 83 325 IPR036652 -
Pvu9g0392 540 PANTHER NAD(P)H-HYDRATE EPIMERASE 81 525 IPR032976 -
Pvu9g0392 540 Pfam Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 496 540 IPR019576 -
Pvu9g0392 540 TIGRFAM yjeF_nterm: YjeF family N-terminal domain 89 283 IPR004443 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0392 K23998 - gmx:100795497 976.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0392 9 7801750 7807787 Pvu9g0392 9 7801750 7807787 ECH