Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0374 ATGCCAACTAACGACGATTTTCAAGGAGTTTCAAATTGCTATGTGTTCAAGAGTCGATTGCAGGAGTATGCGCAGAAGGCAGGGCTTCCCACGCCTGTCTATGAAACTGTCAAGGAAGGGCCTTCCCATGAGCCTTCTTTCAGGTCAACAGTGATAGTGAATGATGTTCGGTATGATTCTTTGCCTGGATTTTCCAACCGGAAGGCAGCAGAGCAGTCGGCTGCCGAGGTTGCTTTGGTGGAGTTGGCCAAATCGAATGTAGTTAATCAATCCATCACTCAACCTGTTCATGAAACAGGATTGTGCAAAAATTTACTTCAGGAATATGCCCAGAAAATGAACTACGCAATGCCTATGTATCAGTGCAAAAAGGATGAAACACCTGGTCGAGCATCAGTATTTTCATGTACGGTTGACATTGGAGGTATACTCTATATTGGGGGAGCAGCAAAAACCAAGAAGGAAGCAGAGATTAAAGCTGCCAGAACTGCTTTATTAGCTATCCAGTCAAGTGCAACTCATGCTTCCCAAAACCAGGTTGGCCATCCAAAGTTGACAGTCCTTCCATGTAGAAAAAGGGTTGCAGAATCCGTTTCTATAGCCGATGAAAATTCAAATACTCCAAAGCCCAAGAAAGCTAGATTTAAAAGGAAATCTTCTAAGAGGAAAAATCCTAGAGATAAGATAGGCCCGATTCATACTGAAAATGTTGTCGGTATTGGAACAAATATCAATCATGAAGTAGAAACACAAGCAAGTGTTAATGATGAATCTGGTGTGCATGAAATGAAATCTGAAAAATTCACTTCAGAAGTCATGAAGAATTTAGAGAATGGAATATCATTTAATTATCCCGAGAAAGAAGTGTTTGCTGTGGAGAGTTCTTTTGTTTTTGAAAATGGAAAGTCAGCAGAATTGTATTCCAAGGAGAACAATCTTGGTTCTGTTGTTGCAGAACTCTCTTCCGTGTCTAATGGAGACATATTGGAAACAAGTGTGGAGATGAACAAACAGCAATACAATGGAGAAATGGTTTCCGACCATTGTGTTGTAGGGGGTTGA 1062 0.4096 MPTNDDFQGVSNCYVFKSRLQEYAQKAGLPTPVYETVKEGPSHEPSFRSTVIVNDVRYDSLPGFSNRKAAEQSAAEVALVELAKSNVVNQSITQPVHETGLCKNLLQEYAQKMNYAMPMYQCKKDETPGRASVFSCTVDIGGILYIGGAAKTKKEAEIKAARTALLAIQSSATHASQNQVGHPKLTVLPCRKRVAESVSIADENSNTPKPKKARFKRKSSKRKNPRDKIGPIHTENVVGIGTNINHEVETQASVNDESGVHEMKSEKFTSEVMKNLENGISFNYPEKEVFAVESSFVFENGKSAELYSKENNLGSVVAELSSVSNGDILETSVEMNKQQYNGEMVSDHCVVGG* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0374 353 Pfam Double-stranded RNA binding motif 17 79 IPR014720 -
Pvu9g0374 353 Pfam Double-stranded RNA binding motif 103 166 IPR014720 -
Pvu9g0374 353 SUPERFAMILY dsRNA-binding domain-like 103 170 - -
Pvu9g0374 353 SMART DRBM_3 16 83 IPR014720 -
Pvu9g0374 353 SMART DRBM_3 102 169 IPR014720 -
Pvu9g0374 353 CDD DSRM_AtDRB-like_rpt1 15 83 IPR044450 GO:0003725
Pvu9g0374 353 SUPERFAMILY dsRNA-binding domain-like 15 84 - -
Pvu9g0374 353 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 101 170 IPR014720 -
Pvu9g0374 353 Gene3D - 16 97 - -
Pvu9g0374 353 PANTHER RIBONUCLEASE III 1 297 IPR011907 GO:0003723|GO:0004525|GO:0006364
Pvu9g0374 353 CDD DSRM_AtDRB-like_rpt2 100 169 IPR044451 GO:0003725
Pvu9g0374 353 PANTHER DOUBLE-STRANDED RNA-BINDING PROTEIN 1 1 297 IPR031147 GO:0003725
Pvu9g0374 353 Gene3D - 98 170 - -
Pvu9g0374 353 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 15 84 IPR014720 -
Pvu9g0374 353 MobiDBLite consensus disorder prediction 199 234 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0374 - - gmx:100782651 575.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0374 9 7644054 7647060 Pvu9g0374 9 7644054 7647060 ECH