Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0354 ATGGAGAATATTTGCAACGAAGAGACTCATGCTCTGATAAAGTCAACATCGCACAACGGATCCAACACTCACACTCACTCTCTCTTCCACCGATCATGTTCTGAATCCAAGAAACTATGGCAAATCGCCGCCCCTTCGATCTTTACCCGTCTAGCCATGTTCTCCATCACCGTCGTCACCCAGTCCTTCGCCGGCCACCTTGCCGACCTCGATCTCGCCGCCATTTCCATCGCTTGCACCGTCCTCATCTCCATCACCTTCGGCTTCATGTTGGGTATGGCGAGTGCGCTGGAGACGCTATGCGGCCAGGCCTACGGCGCCGGAAACCACCGCATGTTGGGCGTTTATCTGCAACGCTCGTGGGTTGTTCTGTCCCTGTCCTCGATTCTGATGCTGCCGTTGTTCGTGTTCGCGACGCCGCTGCTGAAGTTGGTGGGGCAGCCCGTCGCGGTGGCGGAACAGGCGGGGCTGGTGGCGGTCTGGTTGATCCCGTTTCACCTCAGTTTCCCGTTTCAGTTCACATTGCAGCGGTTCCTGCAGTGCCAGTTAAAGACCGGTATCGTCGCTTGGGTTTCAGGGGTGGCTCTTGCGATTCATGTTTTGGTGAGTTTGGTTCTTGTTTATAGGATGAGAGTTGGGATCGTTGGCACTGCACTTTCCATTGGTTTCTCGTGGTGGCTCTCGGTTTTGGGAATGCTTGGTTATACACTCTTCGGTGGGTGCCCGTATTCGTGGACTGGTTTTTCTGCTGAAGCTTTTGTTGGTCTCTGGGAATTCTTTAAACTCTCTTTGGCTTCTGGGGTCATGCTTGCGTTAGAGAATTTCTATTACCGACTGTTGCTTATAGTCTCTGGATATATGCATAACACTGAGATTGCAATTGATGCTCTTTCAGTTTGTGTGACGATATTTGGTTGGGAATCCATGGTACCGCTTGCATTTTTGGGTGCAACCGGGGTTCGTGTAGCAAACGAGCTTGGCGCAGGCAATGCAAAAGGTGCAAAATTTGCAACTGTGGTTTCTGTGGTAAATACTGTAGTGGTGGGATTTATATTTTGGCTGGTAATCGTGTTCTTCAACAAGAATCTCGCCTTGATATTTACATCGAGCTCATCCGTTATCCAAATGGTCAATGACCTGGCAATGTTGTTAGCTTTTACTGTTCTTCTTAATTGCATTCAACCAGTTCTTTCGGGGGTGGCAGTTGGATGTGGTCGACAAGCAGTGGTGGCATATATAAACATTGGCAGTTACTACTTGGTTGGAATACCTCTGGGGGTTCTCCTTGGGTGGTTGCTTCCTTCTAATGTTGTTGTTCAGAAAGTTCAAATTCTTATTGAAGAGGAAGCAACATGCAACCAATAA 1365 0.4916 MENICNEETHALIKSTSHNGSNTHTHSLFHRSCSESKKLWQIAAPSIFTRLAMFSITVVTQSFAGHLADLDLAAISIACTVLISITFGFMLGMASALETLCGQAYGAGNHRMLGVYLQRSWVVLSLSSILMLPLFVFATPLLKLVGQPVAVAEQAGLVAVWLIPFHLSFPFQFTLQRFLQCQLKTGIVAWVSGVALAIHVLVSLVLVYRMRVGIVGTALSIGFSWWLSVLGMLGYTLFGGCPYSWTGFSAEAFVGLWEFFKLSLASGVMLALENFYYRLLLIVSGYMHNTEIAIDALSVCVTIFGWESMVPLAFLGATGVRVANELGAGNAKGAKFATVVSVVNTVVVGFIFWLVIVFFNKNLALIFTSSSSVIQMVNDLAMLLAFTVLLNCIQPVLSGVAVGCGRQAVVAYINIGSYYLVGIPLGVLLGWLLPSNVVVQKVQILIEEEATCNQ* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0354 454 PANTHER PROTEIN DETOXIFICATION 17 437 - -
Pvu9g0354 454 TIGRFAM matE: MATE efflux family protein 45 430 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu9g0354 454 Pfam MatE 45 203 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu9g0354 454 Pfam MatE 267 427 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu9g0354 454 CDD MATE_eukaryotic 35 433 IPR045069 GO:0042910|GO:1990961
Pvu9g0354 454 PANTHER MULTIDRUG RESISTANCE PROTEIN 17 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0354 Pvu-Chr9 7362014 7366540 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0354 K03327 - gmx:100814869 756.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0354 9 7362014 7366540 Pvu9g0354 9 7362014 7366540 ECH