Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0353 ATGGAGAGCTTCAAAGGAGACGACGAAAGAGCAAAAACACTTGCGGAAGCTCTTCTACAACCAGAAGATGCGGTTATTCATGCAGAACAACAACACGAACAACCGTACGAGGAACAAAGTTTTGGTAACAAACTCTGGCTCGAAACGAGGAAGCTATGGATAATTGTGGGGCCCTCCATCTTCAGCCGCCTCGCCATGTTCAACATGAACGTTGTCACCCAAGCCTTCGCCGGCCACTTGGGTGATGTCGAACTCGCCGCCATTTCTATAGCAAACACCGTCATCGTTGGCTTCAATTTCGGCCTCCTCCTGGGGATGGCGAGTGCGTTGGAGACACTGTGCGGGCAAGCGTTTGGGGCGAAGAGATACCACATGTTGGGAATATACATGCAGAGGTCGTGGATTGTTCTGTTCCTGTGCTGTTTCCTGCTGTTGCCGTTTTATGTATTCGCAACGCCCCTTCTGAAATTTCTTGGGCAGCCGGAGGATGTGGCGGAGTGGAGCGGTGTGGTGGCGGTGTGGCTGATTCCTCTGCACTTCAGTTTTGCGTTTCAGTTCCCTCTGCAAAGGTTCCTACAGTGCCAGCTGAAGACGGCGGTTATTGCGTGGGTGTCCCTGGTGGGTTTGGTGGTGAATGTGGTGACTAGTTGGCTCTTGGTGTATGTGTGGGATTTTGGACTTTATGGCGCAGCTATTTCTTTGGACATATCATGGTGGGTTTTGGTTCTTGGCATGTATGCTTATACTGCCTATGGTGGATGCCCTTTAACTTGGACTGGTTTCTCCGTTGAAGCCTTTTCTGGACTCTGGGAATTCCTCAAACTCTCTTCTGCTTCTGGGGTCATGTTATGCTTGGAGAATTGGTACTACAGAATACTTGTCCTTATGACTGGCCAGTTGGAGAATGCCACCATCGCCATTGATGCCTTGTCTGTATGTATGACCATTAATGGGTGGGAGATGATGATTCCACTGGCTTTTTTCGCCGGCACAGGAGTAAGGGTGGCAAACGAGCTAGGTGCAGGGAATGCAAAAGGAGCAAAGTTTGCAACGCAAGTGTCAGTAGCACAGTCAATTGTGATTGGAGTTGTTTTATGCGTGCTGATAATGATATTCCATGAGTATTTGGCATACATATTCACCACCAGCTCTTCTGTAATAGAAGCCGTTCATAACATGTCATTCCTCTTAGCCCTCACAATTCTTCTCAATAGTGTTCAGCCTATTTTGTCAGGAGTGGCTGTTGGTTCGGGATGGCAAGCATACGTAGCATACATAAACATAGGAAGCTATTACCTCATCGGACTCCCACTCGGAATTATCATGGGATGGGTCTTCAAAACTGGTGTTGCGGGTATATGGACTGGTATGATCTTCGGTGGCACAGCACTTCAAACGTTGATACTCATCATAATAACAGCACGATGTGATTGGGAAATGGAGGCGAACAAAGCTCGGTTTCGTGTAAGTAAGTGGACCAGATCTAACTCCAATGCCGCACTGCAAATCTCCAATTAA 1518 0.4802 MESFKGDDERAKTLAEALLQPEDAVIHAEQQHEQPYEEQSFGNKLWLETRKLWIIVGPSIFSRLAMFNMNVVTQAFAGHLGDVELAAISIANTVIVGFNFGLLLGMASALETLCGQAFGAKRYHMLGIYMQRSWIVLFLCCFLLLPFYVFATPLLKFLGQPEDVAEWSGVVAVWLIPLHFSFAFQFPLQRFLQCQLKTAVIAWVSLVGLVVNVVTSWLLVYVWDFGLYGAAISLDISWWVLVLGMYAYTAYGGCPLTWTGFSVEAFSGLWEFLKLSSASGVMLCLENWYYRILVLMTGQLENATIAIDALSVCMTINGWEMMIPLAFFAGTGVRVANELGAGNAKGAKFATQVSVAQSIVIGVVLCVLIMIFHEYLAYIFTTSSSVIEAVHNMSFLLALTILLNSVQPILSGVAVGSGWQAYVAYINIGSYYLIGLPLGIIMGWVFKTGVAGIWTGMIFGGTALQTLILIIITARCDWEMEANKARFRVSKWTRSNSNAALQISN* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0353 505 CDD MATE_eukaryotic 48 484 IPR045069 GO:0042910|GO:1990961
Pvu9g0353 505 TIGRFAM matE: MATE efflux family protein 58 454 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu9g0353 505 PANTHER MULTIDRUG RESISTANCE PROTEIN 33 486 - -
Pvu9g0353 505 PANTHER PROTEIN DETOXIFICATION 33 486 - -
Pvu9g0353 505 Pfam MatE 58 218 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu9g0353 505 Pfam MatE 280 440 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0353 Pvu-Chr9 7354636 7358631 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0353 K03327 - gmx:100500204 853.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0353 9 7354636 7358631 Pvu9g0353 9 7354636 7358631 ECH