Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0347 ATGGCATCCTCCACTGCTCTGGTTTTGGGCTCACTCATAGCAGTCACCATGGTCCTTCCAACCCTGGCAACCCTCCACACCGTGGGAGATTCTTCAGGTTGGGCAATTGGTGCTGATTATAGTTCATGGACTAGTGGCAAGACCTTCGCAGTGGGTGATACTCTCGTGTTCAACTATGGAGCTGGGCACACAGTGGATGAAGTTAAAGAGAGTGACTACAAATCATGCACCGCAGGGAATTCAATTAGTTCAGACAGTAGTGGTGCAAGCACAATTGCCCTCAAGACTGCAGGCACTCATTACTTCATATGTTCTGTTCCTGGACATTGTTCTGGTGGCATGAAACTCGCCGTCACTGTCAAAGCAGGAAAAGACACTACTCCTTCAACTGGGACGGCTTCACCTTCTGATGGCACAGCCACCACAGCCACACCGACAAGCACCACCACAACCACTGCTGCTAAATCAAACTCGGCTTCAACAAGTAGTGTGTCATCAATTGTTGCCATGTTGATTGTTTCATGGATCTCTTTCTGTGTCTTGCGCCTGGTGTAA 555 0.4901 MASSTALVLGSLIAVTMVLPTLATLHTVGDSSGWAIGADYSSWTSGKTFAVGDTLVFNYGAGHTVDEVKESDYKSCTAGNSISSDSSGASTIALKTAGTHYFICSVPGHCSGGMKLAVTVKAGKDTTPSTGTASPSDGTATTATPTSTTTTTAAKSNSASTSSVSSIVAMLIVSWISFCVLRLV* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0347 184 MobiDBLite consensus disorder prediction 125 155 - -
Pvu9g0347 184 SUPERFAMILY Cupredoxins 23 120 IPR008972 -
Pvu9g0347 184 Pfam Plastocyanin-like domain 34 114 IPR003245 GO:0009055
Pvu9g0347 184 ProSiteProfiles Phytocyanin domain profile. 24 122 IPR003245 GO:0009055
Pvu9g0347 184 CDD Phytocyanin 24 120 - -
Pvu9g0347 184 PANTHER BLUE COPPER PROTEIN-LIKE 12 181 - -
Pvu9g0347 184 PANTHER BLUE COPPER PROTEIN 12 181 IPR039391 GO:0009055
Pvu9g0347 184 ProSitePatterns Type-1 copper (blue) proteins signature. 98 114 IPR028871 -
Pvu9g0347 184 Gene3D - 22 127 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0347 Pvu-Chr9 7273480 7274568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0347 8 120 Miscellaneous Gene Families AT1G22480 60.177 5.87e-41 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0347 - - var:108331136 244.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0347 9 7273480 7274568 Pvu9g0347 9 7273480 7274568 ECH
Pvu8g1836 8 46696137 46697372 Pvu9g0347 9 7273480 7274568 PCT