Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0343 ATGTTTGGAGGGATGAGCCTTGAGGCTCCCATCACTTGGTGTTTGTGTTTCAAACCAAAACTAAAAACAAACACTACAAATATGCAGCCACCGCTCAAATCTCGCTCTCGCAGCCGCCAAGGATATACTACAACCGTCACAAACGCGATGGCGCTTGCTTTTGAGGTTCTTGGCAGATTCAACCGTGCTCGCGCTGCTCGGTTGACACTCCCTCATCATGTGTGCCAAACTCCTTTGTTTATGCCCGTGGGCACGCAAGGAACAATAAAGGGATTGACAAATAGCCAGCTTGAGGATATAGGTTGTCAAATAATACTTGGAAATACTTATCACTTGGCCCTTCGACCTACTTCTGAGCTTCTTGATGAAGTTGGCGGCCTTCATAAATTTATGAATTGGCAACGAGGTCTGCTTACAGATTCTGGTGGCTTTCAAATGGTTTCGCTGTTGCATCTTGCTGATATCACGGAAAAAGGTGTGACATTTCAGTCACCTGTTGATGGAAAGCCAATGCTTCTTACACCTGAGGAATCAATTGAAATCCAAAATAGAATTGGAGCAGATATCATTATGGCTCTAGATGATGTTGTAAAGACCACCATTACTGGTCCACGAGTTGAGGAAGCTATGTATCGAACACTTAGATGGATAGACAGATGTATAGCAGCTCACAAGAGACCTCATGATCAAAACTTATTTGGTATTGTGCAAGGTGGTTTAGATCCTATATTGAGGGATATCTGTGCCAAAGGTTTGGTGGAGCGCAATTTGCCTGGCTATGCTATTGGTGGTCTTTCAGGCGGTGAAGATAAAAATTCATTTTGGCGAGTTGTTGCTCAGTGCACTGCTGCTTTGCCAGAGCATAAACCACGATATGTTATGGGAGTTGGTTATCCTCTTGATATTGTTGTTTGTAGTGCTTTGGGTGCTGACATGTATGACTGCGTGTATCCCACTCGAACAGCACGCTTTGGCACTGCTCTCATTCCTGAGGGAGTATTGAAATTAAAACACAAAGCAATGGCTGATGACACCCGTCCAATTGATCCTACTTGCCCTTGTATGGTTTGCAAGAACTATACCAGGGCTTACATCCATTGCCTTGTGACAAAAGATGCAATGGGATCTCAACTTTTGTCGTATCATAATTTATACTACATGCTGCAGCTCAGTAGGAATCTACACTCTTCAATAGTTGAAGGAAGGTTCCCAGAGTTTGTATGCGACTTTCTACACAAAATGTTTCCCAAAGGTGATGTTCCTGAATGGGTATGCGATGCTATGGAGGTGGCTGGAATCGACATTTCCTCCTGTTGTGCTCCATTTTCATCATGCGAAGAATATGATTCTAAAAGCATGCCCGAAGAAGTTAGTTTAGCCAGGTAA 1386 0.4358 MFGGMSLEAPITWCLCFKPKLKTNTTNMQPPLKSRSRSRQGYTTTVTNAMALAFEVLGRFNRARAARLTLPHHVCQTPLFMPVGTQGTIKGLTNSQLEDIGCQIILGNTYHLALRPTSELLDEVGGLHKFMNWQRGLLTDSGGFQMVSLLHLADITEKGVTFQSPVDGKPMLLTPEESIEIQNRIGADIIMALDDVVKTTITGPRVEEAMYRTLRWIDRCIAAHKRPHDQNLFGIVQGGLDPILRDICAKGLVERNLPGYAIGGLSGGEDKNSFWRVVAQCTAALPEHKPRYVMGVGYPLDIVVCSALGADMYDCVYPTRTARFGTALIPEGVLKLKHKAMADDTRPIDPTCPCMVCKNYTRAYIHCLVTKDAMGSQLLSYHNLYYMLQLSRNLHSSIVEGRFPEFVCDFLHKMFPKGDVPEWVCDAMEVAGIDISSCCAPFSSCEEYDSKSMPEEVSLAR* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0343 461 SUPERFAMILY tRNA-guanine transglycosylase 50 413 IPR036511 GO:0006400|GO:0016763
Pvu9g0343 461 PANTHER QUEUINE TRNA-RIBOSYLTRANSFERASE CATALYTIC SUBUNIT 1 47 438 - -
Pvu9g0343 461 Gene3D - 49 416 IPR036511 GO:0006400|GO:0016763
Pvu9g0343 461 Hamap Queuine tRNA-ribosyltransferase [tgt]. 52 413 IPR004803 GO:0008479|GO:0101030
Pvu9g0343 461 TIGRFAM Q_tRNA_tgt: tRNA-guanine transglycosylase 54 414 IPR004803 GO:0008479|GO:0101030
Pvu9g0343 461 Pfam Queuine tRNA-ribosyltransferase 62 414 IPR002616 GO:0006400|GO:0016763
Pvu9g0343 461 TIGRFAM tgt_general: tRNA-guanine family transglycosylase 54 414 IPR002616 GO:0006400|GO:0016763
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0343 Pvu-Chr9 7200149 7210238 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0343 K00777 - gmx:100819664 870.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0343 9 7200149 7210238 Pvu9g0343 9 7200149 7210238 ECH