Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0335 ATGGCCACCACCGCTTACAACTCTCTCCTTCCAACCAAATCCATTCTTCCAACCCACCCTCTCACGCATTCCTCCACTACCCAATGCTACTCCGTTCCCGGGCCCAAGCCCAGGCCCATCCAATCCGTTCACGCGGCCGACAAGCCCGTAAGTGTAGTAACCGACGGCAAACAGCAGCAACCGAGGCATGAGGCCAAGTGGGCCGTGGACAGCTGGAAGTCCAAAAAGGCCCAGCAGCTCCCGGAATACCCGAACCAAGAGAAGCTCCAGGAGGTGCTCAAGAGCCTCGAAACGTTCCCTCCTATCGTCTTCGCCGGAGAGGCTCGCAATCTGGAGGAGCGCCTCGCCGATGCCGCCGTGGGGAATGCGTTCCTCCTCCAGGGCGGAGACTGCGCCGAGAGCTTCAAGGAGTTTCACGCCAACAACATCCGCGACACCTTCAGAATCATCCTCCAGATGAGTGTGGTTATGATGTTCGGTGGTCAGATGCCCGTTATTAAGGTGGGACGAATGGCGGGTCAGTTCGCGAAACCGAGATCGGAGCAGTTGGAGGAGAAGAACGGGGTAAAACTCCCCAGCTACAGAGGCGATAACGTGAACGGAGATGCGTTCGAGGAGAAAGCCAGAATTCCTGATCCTGAAAGGATGATTAGAGCGTATAGCCAATCCGCTGCCACTCTGAATCTTCTCAGGGCATTCGCAACGGGAGGCTACGCCGCTATGCAAAGGGTTGGTCAATGGAATTTGGACTTCACAGAGCACAGCGAACAAGGAGACAGGTACCTAGACTTTGCACACAGAGTCGATGAGACCCTTGGTTTCATGGCTGCTGCAGGCCTCACGGTGGAGCATCCTATAATGAAAACAACTGAGTTCTGGACCTCACATGAATGTCTGTTGTTGCCATACGAACAATCACTCACTAGGTTGGATTCAACTTCTGGTCTCTACTATGACTGCTCCGCGCATATGCTATGGGTTGGGGAACGGACCAGGCAGCTGGATGGTGCTCATGTCGAGTTTCTAAGAGGAGTTGCCAATCCTCTTGGAATCAAGGTAAGTGATAAGATGGATCCAAATGAGCTTGTTAGACTGATCAACATCTTGAACCCCCAAAACAAACCAGGGAGAATATCTGTGATCACGAGGATGGGAGCTGAAAATATGAGGGTCAAGCTTCCACATCTGATCAGGGCAGTACGCAGAGCTGGACATACTGTAACTTGGGTCAGTGATCCTATGCATGGAAACACCATAAAGGCTCCGTGTGGACTCAAAACTCGTCCATTTGATGCCATCAGGGCGGAGGTGAAAGCATTCTTCGACGTGAATGAACAGGAAGGAAGCCACCCAGGTGGGGTTCATCTAGAGATGACGGGCCAGAATGTGACTGAGTGCATTGGTGGATCAAGAACTGTCACCTTTGATGATCTGGGTTCACGTTACCACACACACTGTGATCCCAGGCTTAATGCTTCACAATCTCTTGAGCTTGCTTTCATCATTTCTGAACGCCTCCGGAAGCGTAGGATCGGATCGGATGGCGCCAGTATCTTTTCTCTCTAG 1566 0.5243 MATTAYNSLLPTKSILPTHPLTHSSTTQCYSVPGPKPRPIQSVHAADKPVSVVTDGKQQQPRHEAKWAVDSWKSKKAQQLPEYPNQEKLQEVLKSLETFPPIVFAGEARNLEERLADAAVGNAFLLQGGDCAESFKEFHANNIRDTFRIILQMSVVMMFGGQMPVIKVGRMAGQFAKPRSEQLEEKNGVKLPSYRGDNVNGDAFEEKARIPDPERMIRAYSQSAATLNLLRAFATGGYAAMQRVGQWNLDFTEHSEQGDRYLDFAHRVDETLGFMAAAGLTVEHPIMKTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVRLINILNPQNKPGRISVITRMGAENMRVKLPHLIRAVRRAGHTVTWVSDPMHGNTIKAPCGLKTRPFDAIRAEVKAFFDVNEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLGSRYHTHCDPRLNASQSLELAFIISERLRKRRIGSDGASIFSL* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0335 521 Pfam Class-II DAHP synthetase family 67 503 IPR002480 GO:0003849|GO:0009073
Pvu9g0335 521 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 1, 2 29 514 IPR002480 GO:0003849|GO:0009073
Pvu9g0335 521 Gene3D Aldolase class I 100 508 IPR013785 -
Pvu9g0335 521 TIGRFAM DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 67 510 IPR002480 GO:0003849|GO:0009073
Pvu9g0335 521 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 2, CHLOROPLASTIC 29 514 - -
Pvu9g0335 521 SUPERFAMILY Aldolase 58 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0335 Pvu-Chr9 7096829 7101210 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0335 K01626 - gmx:100809016 862.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0335 9 7096829 7101210 Pvu9g0335 9 7096829 7101210 ECH
Pvu8g1827 8 46394099 46398542 Pvu9g0335 9 7096829 7101210 PCT