Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0327 ATGCCGACGCCGGAAGCGGAAGTGGAACCCTCCTCCGATCACATTGACTCTCTTCCGCTAGTTGACCTCCGTCTCCTGTCTCAGCCAGAACTCTACACTCTCTCCCTCTCCGGCGCCACTCACCGCCACCGCCGTGCCAACGACAATGATTCCGTCGTTCCCAAAATCGACCGTTCCAATTTCAACGAATCAGCGGGCAGCCGCAAACAGACCTACTCCAAACTCCGCCTCAACAAGCGGAAACAAAATTTTGCGGTTCCCGCCTCCTCTTCTTTCCACATTCCGGAGCCTGTGGACCAAGAAAACTCTCAAATTATCTCTCTGCTGCAGCAACTCTTTGGCGTGGAGCCTCTCCGTAACGCGCTGCGCCCCGACTGCGGTGATGCGGCGAACCACCAACTGTTTCCGGTCCATGTCGAGTTCAAACAACCTCCTCCCGTGACGGTGACGTTTCAAACCGTCCCGATTGACGTTATTGATGCTTCTAATAGGAAGAGGAAGCGCGGGCGACCGAGGAAGAACGAGAATTTGGTATCGGTTTTCGAAGAGGAGACTAAGAAGGTTAACGAAGGGCGCAGCGCAGTAGCCACGGTCATCGAGAGGGGATTTGGCGTGGATGCGGACGGTTTGGATAATGATCCGTTTGGGGAGGAGTTGAAGAGAAGGACCGCAGGGTTGGAGACGGAGCCACAGTTATTGGAATTTTTGGAAACTCTGAATGGAGAGTGGGCGAGTCAGAGGAAGAAGAGGCGGATTGTCCAGGCCAGTGATCTTGGCACCGTGTTGCCTGCCGGATGGAAGATAGTTATTACCCTTTTGAGGAGGGCAGGTCGTGCCTCTGTTGTTTGTCGCCGTTACGTAAGTCCTGGTGGGCATCAGTTTGAGTCTTGCAAAGAAGCTTCTGCATACTTGCTTTCTGTTTCTGGTGTTCAAGATAAGGGCCATTTAAAATCTAGTTATACTGATGATGGTGCTCAGCAATTGTCCAGTAGTATGAACATGGCATCTGAAAATAGTGTTGGTCATGTCCCTACTGGAGATGCGAAGACTGATGCCAATGCACATTATTTGACTTTAGCTGGTGCATCTATTCACTCTGGTCATGAGAAGCAGCCCCCAATATCATCATCATTTGGGAGTGAAAATATCAATAGTGATCTGGCTTTGGGTTGTAAATTAGGAGATGCTAGTGAAGACTTTAGAGGCTTTGACCATCAGTCGGAAGATAAAAAACTGTTGGAGGCTGATAAGAATGATGGAAATTCAGTTCAGGGATGTTCTCGCGTGAATGATAGAGTTTGTAATGTAGGTAGTGAGAAGTTGGTTGGTGCTATTGAGTCTACTGATGCTGCATGCAATCTTTATATTCCTTTAGTTTTCTCAACTCCTTTCTCCAATAATAATAGTGACAATGGTCAAATTTCAGAGGATATAAATGCTGCCACATGCATAAAAGGGGCCATTAGTAATTTTCCTAGTCAGGATAGAAATACTGGATGCCCTGAAACTGTTCCCTGTGGAGTTGACAACAATGGGCTTGGGCTTTCTGTGAAATTAGTAGAAGAGAACACTCATAAAATAAGTTTTGATAGCAGCATACTGGCTCCAAATGCTGAGGGGAAAATATTTGCTGGTAAAAATTTAGGGGATAGACATCTTGCCAGTTCACAGGAGGATATGGAGATTAGAGATGAAAAGGCCATTAATGATGACAAACAACTAAATTTGTGTAGCACAGACCAGGCTGAATTTAAAGACGTTTTTACTGATGTTGAACTGCAGAGTAGTTCTGAGGGTTGCTCACTTGTCTCATCTCATTGTGAACTTAAACATACATCTCTAAGTAATATTGACAGGACACAGACTTCTGAGTTGAAGGACTCTGCTGAGGAAAATATTTTTGACAGTGATCTATTTAGCTCATCTATTGATGAAAGAACATGTGTTCACACTGGTTACATTAGTAATGTTTCTTTTAGCTCTTGCCCACAAGATGCATCTGAGTTTGGTGGATTTGATTTTGCTTCTGATCTTAAGTTAACTAAGGATGTTAGTGCGACTAATCATATTCTTTCTAATGAGGATGCTGTGACGAGATGTTTACAGGAAAGGAGTTCCTTGAATGACCAAAATAGCATGATGGACAATCTGTTGCACAGAAGTTCTCAAAGTAACTTATTTGCTCTAACTGCTAATCAGCACCCTTCTGCTTTTCATGATAATGTGAATGATATCTGTGATGGAACCTTTGATGCACTAAAAGCTGTTGATGCTGGATACATGGAGCCTCAGTTGGGCATTGTTTCTTGCAGCAATATTGCTGTAGATGCATATACTACTGCAAGCATTAAGCAGGGAAACTCACAAGGATGTGTATCTGTTCCTCTTGGTGGAAGTATATTAAACTTTGAGAAGAGAAGTGATGATGGTGTTAATAAATCAAATAAGTCTTGCTTATCAGAAAAGGCTCAGAATGAAGTTGAAATATTCCAAACTGACACTATGGGTCTTCCCAAATTTCTTTAG 2526 0.4406 MPTPEAEVEPSSDHIDSLPLVDLRLLSQPELYTLSLSGATHRHRRANDNDSVVPKIDRSNFNESAGSRKQTYSKLRLNKRKQNFAVPASSSFHIPEPVDQENSQIISLLQQLFGVEPLRNALRPDCGDAANHQLFPVHVEFKQPPPVTVTFQTVPIDVIDASNRKRKRGRPRKNENLVSVFEEETKKVNEGRSAVATVIERGFGVDADGLDNDPFGEELKRRTAGLETEPQLLEFLETLNGEWASQRKKRRIVQASDLGTVLPAGWKIVITLLRRAGRASVVCRRYVSPGGHQFESCKEASAYLLSVSGVQDKGHLKSSYTDDGAQQLSSSMNMASENSVGHVPTGDAKTDANAHYLTLAGASIHSGHEKQPPISSSFGSENINSDLALGCKLGDASEDFRGFDHQSEDKKLLEADKNDGNSVQGCSRVNDRVCNVGSEKLVGAIESTDAACNLYIPLVFSTPFSNNNSDNGQISEDINAATCIKGAISNFPSQDRNTGCPETVPCGVDNNGLGLSVKLVEENTHKISFDSSILAPNAEGKIFAGKNLGDRHLASSQEDMEIRDEKAINDDKQLNLCSTDQAEFKDVFTDVELQSSSEGCSLVSSHCELKHTSLSNIDRTQTSELKDSAEENIFDSDLFSSSIDERTCVHTGYISNVSFSSCPQDASEFGGFDFASDLKLTKDVSATNHILSNEDAVTRCLQERSSLNDQNSMMDNLLHRSSQSNLFALTANQHPSAFHDNVNDICDGTFDALKAVDAGYMEPQLGIVSCSNIAVDAYTTASIKQGNSQGCVSVPLGGSILNFEKRSDDGVNKSNKSCLSEKAQNEVEIFQTDTMGLPKFL* 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0327 841 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 11 784 - -
Pvu9g0327 841 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 252 325 IPR001739 GO:0003677
Pvu9g0327 841 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 11 784 IPR037472 -
Pvu9g0327 841 MobiDBLite consensus disorder prediction 53 69 - -
Pvu9g0327 841 MobiDBLite consensus disorder prediction 43 69 - -
Pvu9g0327 841 SUPERFAMILY DNA-binding domain 257 306 IPR016177 GO:0003677
Pvu9g0327 841 Pfam Methyl-CpG binding domain 259 304 IPR001739 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0327 Pvu-Chr9 6946958 6955842 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0327 - - gmx:100780637 1225.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0327 9 6946958 6955842 Pvu9g0327 9 6946958 6955842 ECH