Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0303 ATGGAGCACTTCAACAACGACGATCTTGAGTGCGTCGGCGACTACTACCACGACGATGACGTTCCTGATTTCCAAGGCCAAAACTCCGCCGACATTCTTCCTCAGCAACCCTCCCATGCCGACTATCACGATTCCGACTTCGACGTTGACGACGAAGATCTTCTACCCAGTAATGCAAAGACTGATACCACCGCTTCAGAAGCAAGAAACGGGAAAGACATCCAGGGAATCCCCTGGGAGAGGCTCAATTATAGCAGAGACGAGTACCGCGAGACTCGATTGAAGCAGTATAAAAATTACGAGAGCCTCTCCCGTTCACGCCACCACCTTCATAAGGAGTGCTTGAACGTGCAGAAGGGGAAGACCTTCTATGACTTCTTCTTCAATACAAGGCTCGTCAAGTCCACAATCGTGCATTTTCAGCTGAGGAATTTGTTGTGGGCAACTTCGAAGCATGATGTATACCTTATGCAAAACTACTCAGTTATGCACTGGTCCGCAGTATTACGAAGGGGTAAAGAAGTGCTTAACGTAGCCAAACCAATTGTTCCAAGCCTTAAGCGTCCTGGATTTTTGGCTCAGCCTGTCTCCAGAGTGCAAATAAGCACCATGATTGTTAAGGAAAATCTGATGGTGGCCGGTGGTTTCCATGGTGAGCTTATATGCAAGAATTTGAAGCAGCCTGGAGTTCTATTTTGTGATAAAATAACTACAGATGATACTGCCATAACCAATGCTGTGGATGTTTACCGCAATCCAGCTGGATCGTTGAGAGTCATCACAGCAAATAATGATTCCCAAGTTCGGGTTTTTGATGCAGAGAATTTTGCTTCTCTTGGTTGTTTCAACTATGATTGGTCTGTTAATAATATTTCTGTTAGCCCGGATGGGAAGTTGTTAGCTGTACTTGGGGACAGCAGTGAGTGCTTGATAGCTGATGCTAACAATGGAAAGGTTACTGGAAGCTTAAAAGGTCACTTGGACTACTCTTTTGCATCGGCTTGGCACCCGGATGGACGGATATTGGCTACTGGGAATCAGGACACAACTTGCAGGTTGTGGGACATAAGAAATCTTTCACAATCTCTAGCTGTGTTAAAGGGAAGAATGGGCGCAATAAGAGCCTTACGATTCACATCTGATGGACGGTTTTTGGCTATGGCTGAGCCTGCAGACTTCGTCCATATTTTTGACTCTCATTCTGGTTATGTACAAGGTCAAGAAATAGATCTATTTGGCGAGATTGCTGGTATATCCTTTAGCCCAGACACAGAGGCTCTATTTGTGGGCATTGCTGACCGAACCTATGGTAGCTTGTTAGAGTTCGCCAGAAAACGTTACAATTATTACCTAGACCCCATGTTTTAA 1368 0.4525 MEHFNNDDLECVGDYYHDDDVPDFQGQNSADILPQQPSHADYHDSDFDVDDEDLLPSNAKTDTTASEARNGKDIQGIPWERLNYSRDEYRETRLKQYKNYESLSRSRHHLHKECLNVQKGKTFYDFFFNTRLVKSTIVHFQLRNLLWATSKHDVYLMQNYSVMHWSAVLRRGKEVLNVAKPIVPSLKRPGFLAQPVSRVQISTMIVKENLMVAGGFHGELICKNLKQPGVLFCDKITTDDTAITNAVDVYRNPAGSLRVITANNDSQVRVFDAENFASLGCFNYDWSVNNISVSPDGKLLAVLGDSSECLIADANNGKVTGSLKGHLDYSFASAWHPDGRILATGNQDTTCRLWDIRNLSQSLAVLKGRMGAIRALRFTSDGRFLAMAEPADFVHIFDSHSGYVQGQEIDLFGEIAGISFSPDTEALFVGIADRTYGSLLEFARKRYNYYLDPMF* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0303 455 PANTHER WD REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_8G05640)-RELATED 1 454 - -
Pvu9g0303 455 MobiDBLite consensus disorder prediction 16 69 - -
Pvu9g0303 455 PANTHER OS03G0386000 PROTEIN 1 454 - -
Pvu9g0303 455 SUPERFAMILY WD40 repeat-like 195 435 IPR036322 GO:0005515
Pvu9g0303 455 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 323 358 - -
Pvu9g0303 455 ProSiteProfiles Trp-Asp (WD) repeats profile. 323 364 IPR001680 GO:0005515
Pvu9g0303 455 ProSitePatterns Trp-Asp (WD) repeats signature. 342 356 IPR019775 -
Pvu9g0303 455 Pfam WD domain, G-beta repeat 318 355 IPR001680 GO:0005515
Pvu9g0303 455 Gene3D - 232 445 IPR015943 GO:0005515
Pvu9g0303 455 SMART WD40_4 359 398 IPR001680 GO:0005515
Pvu9g0303 455 SMART WD40_4 275 313 IPR001680 GO:0005515
Pvu9g0303 455 SMART WD40_4 316 355 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0303 Pvu-Chr9 6490065 6494929 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0303 241 435 Miscellaneous Gene Families AT5G08390 25.510 4.69e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0303 - - gmx:100775453 775.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0303 9 6490065 6494929 Pvu9g0303 9 6490065 6494929 ECH