Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0296 ATGGCTGACATTGGGCGTCGGAATGGATATCCAAATAGTGTACAGCCAAATAGGCACCCTGCTGCAATATCTGAAGTAGATGAATTCTGCAGTGCCCTTGGCGGAAACAGGCCAATTCATAGCATTTTAATTGCAAACAATGGAATGGCAGCAGTCAAGTTCATACGTAGTGTTAGAAGCTGGGCCAATGAGACATTTGGCACAGAGAAAGCCATCTTGTTGGTTGCCATGGCTACTCCAGAGGACATGAGAATCAATGCGGAACATATAAGAATAGCCGATCAATTTGTCGAAGTACCTGGTGGGACCAATAACAATAACTATGCCAATGTGCAGCTTATTCTTGAGATGGCTGAGATAACTCATGTTGATGCGGTGTGGCCTGGTTGGGGTCATGCTTCAGAAAATCCTGAGCTTCCAGATGCGTTGAAAGCAAGAGGAATTGTATTTCTTGGACCTCCTGCCGTATCTATGGCTGCTTTGGGAGATAAAATTGGTTCATCCTTGATTGCTCAAGCAGCAGAAGTGCCAACCCTTCGATGGAGTGGTTCTCATGTGAAAATTCCTCCTGAAAGTTCCTTGATTACTATTCCTGATGAAATTTATCGGGAAGCATGTGTGTACACAACAGAGGAAGCAGTAGCGAGTTGTCAAGTTGTAGGATACCCTGCCATGATCAAAGCATCTTGGGGTGGTGGTGGTAAAGGAATAAGAAAGGTTCATAATGATGATGAGGTAAGGGCATTGTTCAAGCAAGTTCAAGGTGAAGTTCCCGGTTCACCTATATTTATAATGAAGGTTGCATCCCAGAGTCGACATCTAGAAGTCCAGTTACTTTGTGATCAGTACGGAAATGTAGCTGCTTTGCATAGTCGTGATTGCAGTATTCAAAGGAGGCACCAAAAGATTATTGAGGAGGGCCCCATTACCGTAGCACCCATAGAAACAGTGAAACAACTGGAACAAGCAGCTAGAAGGTTGGCTAAATCTGTAAATTATGTCGGGGCAGCTACTGTTGAGTATCTTTTTAGTATGGAAACTGGAGAGTACTACTTTTTAGAGTTGAACCCTCGGCTACAGGTTGAACATCCTGTTACTGAGTGGATAGCAGAGATAAATCTGCCAGCAGCCCAAGTTGCCGTTGGGATGGGTGTCCCTCTCTGGCAAATTCCTGAAATAAGGCGTTTCTATGGGGTGGAGCATGGTGGAGGGTATGATGCTTGGAGAAAAACTTCAGTTTTAGCTACCCCTTTTGATTTTGACAAAGCACAATCCACAAGGCCAAAAGGTCATTGTGTGGCTGTGCGAGTGACTAGTGAGGACCCTGATGATGGCTTTAAGCCCACAAGTGGCAAAGTGCAGGAGCTTAGTTTTAAAAGCAAGCCAAATGTGTGGGCATACTTCTCGGTCAAGTCTGGAGGAGGAATTCATGAATTCTCAGATTCACAGTTTGGGCATGTGTTCGCTTTTGGAGAATCTAGGGCTTTAGCAATTGCAAATATGGTTCTAGGGCTGAAGGAGATTCAAATTCGGGGAGAAATCCGTACCAATGTTGATTACACGATTGATCTTCTGAATGCTTCTGACTACAGAGACAACAAAATTCACACAGGTTGGCTGGACAGTAGAATTGCAATGCGGGTTAGAGCAGAGAGGCCTCCGTGGTATCTTTCTGTTGTTGGAGGGGCACTCTATAAAGCTTCTGCTAGCAGTGCAGCTTTGGTTTCAGACTATGTTGGCTATCTTGAAAAGGGACAAATCCCTCCCAAGCACATATCTCTTGTCCATTCTCAAGTGTCCTTGAACATTGAGGGAAGCAAATATACGATTGACATGATTCGAGGTGGATCTGGAAGTTATAGATTGAGAATGAATCAATCAGAGATGGAAGCAGAAATACATACTTTACGTGATGGAGGTTTGCTAATGCAGGCAAAAATGTTATGTATGAAAAAGTACTTAACTTTTTCTAGAGATGTTCAGACCTTTTTTTTTCAAACATTGGAAAGGAATTTACTAACTAGAAGTTTCCACTTGTTACAGCTGGATGGAAACAGTCATGTAATATATGCAGAGGAAGAAGCAGCTGGAACTCGCCTTCTAATTGATGGAAGGACTTGCTTGCTTCAGAATGATCATGATCCATCAAAGTTGGTGGCGGAGACACCATGCAAGCTTTTGAGATATTTGGTTGAAGATGACAGTCATGTTGATGCTGACACACCATATGCTGAAGTTGAGGTCATGAAAATGTGCATGCCTCTTCTTTCACCTGCTTCTGGGATTATTCATTTCAAAATGTCTGAAGGTCAAGCAATGCAGGCTGGTGAACTTATAGCAAGTCTTGACCTAGATGATCCTTCAGCTGTAAGAAAGGCAGAACCCTTCACGGGGAGCTTCCCAGTCCTAGGACCTCCTACTGCAATTTCTGGTAAAGTTCATCAAAAATGCGCTGCAAGCTTAAATGCTGCACGGATGATTCTTGCTGGGTATGAGCACAATATTGATGAAGTTGTGCAAAGTTTGCTTAATTGTCTTGATAGTCCTGAGTTGCCTTTCCTTCAATGGCAAGAGTGTCTGGCAGTTTTGGCAACCCGTCTTCCCAAAGATCTAAAAAATGAGTTGGAATCAAGATATAAGGAGTTCGAGAGGATTTCAAGCTCCCAAATTGTTGATTTCCCTGCCAAATTATTGAAGGGAATTCTTGAAGCTCATCTTTCTTCCTGTCCTGACAAAGAAAAAGGAGCCCAAGAAAGACTAGTTGAACCTCTGCTGAGTCTTGTTAAGTCTTATGAGGGTGGAAGAGAGAGCCATGCCCATATAATTGTTCAATCCCTTTTTGAAGAATATCTTTCTGTTGAGGAATTATTTAGCGACAATATTCAGGCTGATGTAATTGAACGTCTGCGTCTTCAATACAAGAAAGATCTATTGAAGATTGTTGATATAGTGCTCTCTCATCAGGGTGTCAAGAGTAAAAATAAGCTGATATTGCGTCTGATGGATAAATTGGTTTACCCTAACCCTGCTGCCTATAGGGATCAGTTAATCCGTTTTTCCTTACTCAACCATACAAATTATTCAGAGTTGGCACTAAAGGCAAGTCAACTGCTGGAACAAACTAAATTAAGTGAACTTCGATCCAACATTGCTAGAAGTCTTTCTGAACTAGAGATGTTCACGGAGGATGGTGAAAATATTGATACTCCCAAAAGGAAGAGTGCCATCAATGACCGAATGGAGGACCTCGTTAGTGCTCCTTTGGCTGTTGAAGATGCCCTTGTGGGTTTATTCGATCACAGTGATCACACCCTTCAGAGGAGGGTCGTGGAAACTTATATACGCAGACTCTATCAGCCGTATCTTGTCAAAGGGAGTGTCAGGATGCAATGGCACAGGTCTGGTCTTATTGCCACATGGGAGTTCTATGATGAGTACATTGAAAGGAAGAATGGGGTTGAAGACCTAACTTTGAAGAAATCAATCGAGGAGAAAGACAGTGAGAAAAAGTGGGGAGTGATGGTTGTAATTAAATCTCTTCAATTTTTGTCTGCAATTATCAGTGCTGCATTGAGGGAGGCAACCAATAACCTTCATGAAGCCCTGACAAGTGGTTCTGCGGAACCAGTTAACCATGGTAATATGATGCATATTGGATTAGTGGGCATAAACAACCAGATGAGTTTGTTGCAAGACAGTGGTGATGAGGATCAGGCTCAAGAAAGAATCAATAAATTAGCTAAAATACTAAAAGAGCAGGAAGTAGGCTCCACCATTAGAGCTGCAGGTGTTGGTGTAATCAGCTGTATCATCCAAAGGGATGAAGGACGTGCTCCAATGAGGCACTCTTTTCACTGGTCAGAAGAAAAGCTGTACTATGCAGAGGAACCTCTGTTGCGTCATTTGGAACCTCCACTATCCATTTATCTTGAATTGGACAAACTTAAGGGCTATGAGAATATTCGGTATACTCCATCTCGAGATCGTCAATGGCACCTCTACACGGTTATGGATAACAAGCCACAACCAATTCAAAGAATGTTTCTTCGCACACTTCTAAGACAGCCAACCACAAATGAAGGATTTTCTTCGTATCAAAGGCTGGATGCAGAAACATCTCGAATCCAATTGGCTATGTCCTTTACATCAAGGAGCATTTTTAGGTCCTTGATGGCTGCAATGGAGGAGTTGGAACTTAATGCACACAATGCCAATATAAAATCTGAGCATGCTCATATGTACCTCTATATCATACGGGAGCAACAAATAGACGATCTTGTTCCCTATCCGAAGAGAATTAATGTAGATGCTGGGAAAGAAGAAACAACAGTCGAGGCAATCTTGGAAGAATTGGCACAGGAAATCCATTCATCTGTTGGTGTAAGAATGCATAGATTAGGGGTTGTTGTGTGGGAAGTCAAGCTTTGGATGGCAGCCGGTGGACAGGCAAATGGTGCTTGGAGGGTCATTGTAAACAATGTGACTGGTCATACATGCACTGTACACATATACCGAGAAAAGGAGGATACCAACACTCATAAAGTGGTATATAATTCAGTCTCGGTTAAGGGTCCACTGCATGGTGTGCCAGTGAACGAAAATTATCAACCTTTGGGAGTTATTGACCGAAAACGTCTTTCAGCAAGAAAGAACGGCACCACATACTGCTATGATTTTCCTCTTGCATTTGAAACTGCTTTGGAACAGTCATGGGCAGTCCAACATCCAGGATTTCAAAGAGCCAAAGATAAAAATCTTCTAAAGGTAACAGAGCTTAAATTTGCAGAGAGAGAAGGTAGCTGGGGTACTCCTCTTGTTCCTGTGGAGCATTACCCTGGACTCAATGATGTGGGTATGGTAGCCTGGTTTATGGATATGCGTACCCCTGAGTTCCCATCTGGAAGAACAATATTGGTTGTTTCAAATGATGTGACCTTCAAGGCTGGTTCTTTTGGCCCGAGAGAGGATGCTTTCTTCCGTGCTGTAACTGATCTTGCGTGTAAAAGAAAACTACCTTTAATTTATTTAGCAGCAAATTCTGGTGCCCGTTTAGGTGTAGCAGAGGAAGTCAAATCCTGTTTCAGAGTTGGTTGGTCTGAGGAATCTAGTCCTGAGCATGGCTTTCAGTATGTATATTTAACACCTGAGGACTATGCTCGGATAGAATCTTCAGTCATGGCACATGAATTAAAGCTTGAAAGTGGAGAAACTAGATGGGTTATAGATACCATTGTTGGCAAGGAGGATGGCCTTGGGGTTGAAAACTTGAGTGGCAGTGGGGCTATTGCTGGTGCTTATTCAAGGGCATACAAGGAAACTTTTACATTGACATATGTGACTGGCAGAACTGTTGGAATAGGTGCTTATCTTGCTAGGCTTGGGATGAGATGCATACAGAGGCTTGATCAGCCCATAATTCTTACTGGTTTTTCAGCACTAAACAAACTTCTTGGTCGGGAGGTATACAGCTCTCACATGCAACTTGGTGGACCCAAAATCATGGCTACAAATGGAGTAGTTCATCTTACAGTTTCCGACGATCTTGAAGGTGTTTATTCTATTTTGAAGTGGCTTAGCTACATTCCTTCTCATATAGGTGGACCGCTTCCCATTGTTAAGCCTCTTGATCCTCCAGAAAGACCAGTGGAGTATTTACCAGAAAACTCATGTGATCCTCGTGCTGCCATTTCTGGAACCCTGGATGGTAATGGAAGATGGCTGGGAGGCATCTTTGACAAGGACAGCTTTGTGGAGACACTGGAGGGATGGGCTAGAACAGTTGTTACAGGAAGGGCAAAGCTTGGAGGAATCCCTGTGGGAATTGTTGCTGTAGAAACACAGACAGTAATGCAAATAATACCTGCTGATCCTGGTCAGCTCGATTCTCATGAGAGGGTTGTTCCTCAAGCTGGGCAAGTCTGGTTTCCTGATTCTGCAACCAAGACAGCCCAAGCAATATTGGATTTCAATAGAGAAGAACTCCCGCTTTTCATTCTCGCAAATTGGAGAGGCTTTTCAGGAGGGCAAAGGGACCTTTTTGAAGGAATTCTTCAGGCTGGTTCAACTATTGTGGAAAACCTTAGAACATACAAGCAGCCCATATTTGTGTACATCCCAATGATGGGTGAACTCCGAGGTGGTGCATGGGTGGTTGTTGACAGTCAAATCAATTCAGACCACATTGAAATGTATGCTGATCAAACAGCTAAAGGTAATGTCCTTGAGCCAGAAGGAATGATTGAGATCAAATTCAGATCAAGGGAATTGTTGGAGTGTATGGGTAGACTTGATCAACAGTTGATAACTCAGAAGGCAAAACTTCAGGAAGCCAAGAGTAACAGGGACCTTGCCGCCTTTGAATCCCTACAGCAGCAGATTAAATCCCGTGAGAAACAGCTTTTGCCTGTGTATACCCAGATAGCTACAAAGTTTGCTGAACTGCATGATACTTCCTTAAGAATGGCTGCCAAGGGTGTAATTAGGGAAGTTCTGGACTGGCGTAACTCCCGGGCTGTCTTCTACCAGAGACTTCACCGAAGAATTGGAGAGCAGTCACTGATCAACAGTGTGAGAGATGCTGCGGGTGATCATTTGTCACATGCATCTGCAATGAACTTGCTCAAAGAATGGTATTTGAATTCTGATATTGCCAATGGTAGAGAAGATGCATGGTTGGATGATGAAGCCTTCTTCAAATGGAAAAATAATCCTGCACATTACGAGAATAAACTAAAGGAACTGCGTGTGCAGAAAGTGTTACTTCAATTGACAAACATTGGTGACTCAGCTCTAGATTTGCAAGCTCTACCTCAGGGTCTTGCTGCCCTTTTAAGCAACTTGGAGCCTTCGGGTCGTGGGAAGTTGACTGATGAACTTCGAAAGGTACTTGGTTAA 6894 0.4311 MADIGRRNGYPNSVQPNRHPAAISEVDEFCSALGGNRPIHSILIANNGMAAVKFIRSVRSWANETFGTEKAILLVAMATPEDMRINAEHIRIADQFVEVPGGTNNNNYANVQLILEMAEITHVDAVWPGWGHASENPELPDALKARGIVFLGPPAVSMAALGDKIGSSLIAQAAEVPTLRWSGSHVKIPPESSLITIPDEIYREACVYTTEEAVASCQVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVPGSPIFIMKVASQSRHLEVQLLCDQYGNVAALHSRDCSIQRRHQKIIEEGPITVAPIETVKQLEQAARRLAKSVNYVGAATVEYLFSMETGEYYFLELNPRLQVEHPVTEWIAEINLPAAQVAVGMGVPLWQIPEIRRFYGVEHGGGYDAWRKTSVLATPFDFDKAQSTRPKGHCVAVRVTSEDPDDGFKPTSGKVQELSFKSKPNVWAYFSVKSGGGIHEFSDSQFGHVFAFGESRALAIANMVLGLKEIQIRGEIRTNVDYTIDLLNASDYRDNKIHTGWLDSRIAMRVRAERPPWYLSVVGGALYKASASSAALVSDYVGYLEKGQIPPKHISLVHSQVSLNIEGSKYTIDMIRGGSGSYRLRMNQSEMEAEIHTLRDGGLLMQAKMLCMKKYLTFSRDVQTFFFQTLERNLLTRSFHLLQLDGNSHVIYAEEEAAGTRLLIDGRTCLLQNDHDPSKLVAETPCKLLRYLVEDDSHVDADTPYAEVEVMKMCMPLLSPASGIIHFKMSEGQAMQAGELIASLDLDDPSAVRKAEPFTGSFPVLGPPTAISGKVHQKCAASLNAARMILAGYEHNIDEVVQSLLNCLDSPELPFLQWQECLAVLATRLPKDLKNELESRYKEFERISSSQIVDFPAKLLKGILEAHLSSCPDKEKGAQERLVEPLLSLVKSYEGGRESHAHIIVQSLFEEYLSVEELFSDNIQADVIERLRLQYKKDLLKIVDIVLSHQGVKSKNKLILRLMDKLVYPNPAAYRDQLIRFSLLNHTNYSELALKASQLLEQTKLSELRSNIARSLSELEMFTEDGENIDTPKRKSAINDRMEDLVSAPLAVEDALVGLFDHSDHTLQRRVVETYIRRLYQPYLVKGSVRMQWHRSGLIATWEFYDEYIERKNGVEDLTLKKSIEEKDSEKKWGVMVVIKSLQFLSAIISAALREATNNLHEALTSGSAEPVNHGNMMHIGLVGINNQMSLLQDSGDEDQAQERINKLAKILKEQEVGSTIRAAGVGVISCIIQRDEGRAPMRHSFHWSEEKLYYAEEPLLRHLEPPLSIYLELDKLKGYENIRYTPSRDRQWHLYTVMDNKPQPIQRMFLRTLLRQPTTNEGFSSYQRLDAETSRIQLAMSFTSRSIFRSLMAAMEELELNAHNANIKSEHAHMYLYIIREQQIDDLVPYPKRINVDAGKEETTVEAILEELAQEIHSSVGVRMHRLGVVVWEVKLWMAAGGQANGAWRVIVNNVTGHTCTVHIYREKEDTNTHKVVYNSVSVKGPLHGVPVNENYQPLGVIDRKRLSARKNGTTYCYDFPLAFETALEQSWAVQHPGFQRAKDKNLLKVTELKFAEREGSWGTPLVPVEHYPGLNDVGMVAWFMDMRTPEFPSGRTILVVSNDVTFKAGSFGPREDAFFRAVTDLACKRKLPLIYLAANSGARLGVAEEVKSCFRVGWSEESSPEHGFQYVYLTPEDYARIESSVMAHELKLESGETRWVIDTIVGKEDGLGVENLSGSGAIAGAYSRAYKETFTLTYVTGRTVGIGAYLARLGMRCIQRLDQPIILTGFSALNKLLGREVYSSHMQLGGPKIMATNGVVHLTVSDDLEGVYSILKWLSYIPSHIGGPLPIVKPLDPPERPVEYLPENSCDPRAAISGTLDGNGRWLGGIFDKDSFVETLEGWARTVVTGRAKLGGIPVGIVAVETQTVMQIIPADPGQLDSHERVVPQAGQVWFPDSATKTAQAILDFNREELPLFILANWRGFSGGQRDLFEGILQAGSTIVENLRTYKQPIFVYIPMMGELRGGAWVVVDSQINSDHIEMYADQTAKGNVLEPEGMIEIKFRSRELLECMGRLDQQLITQKAKLQEAKSNRDLAAFESLQQQIKSREKQLLPVYTQIATKFAELHDTSLRMAAKGVIREVLDWRNSRAVFYQRLHRRIGEQSLINSVRDAAGDHLSHASAMNLLKEWYLNSDIANGREDAWLDDEAFFKWKNNPAHYENKLKELRVQKVLLQLTNIGDSALDLQALPQGLAALLSNLEPSGRGKLTDELRKVLG* 2298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0296 2297 PANTHER ACETYL-COA CARBOXYLASE, ISOFORM A 12 2296 - -
Pvu9g0296 2297 ProSiteProfiles Biotinyl/lipoyl domain profile. 709 783 IPR000089 -
Pvu9g0296 2297 SUPERFAMILY Single hybrid motif 715 785 IPR011053 -
Pvu9g0296 2297 ProSitePatterns Biotin-requiring enzymes attachment site. 740 757 IPR001882 -
Pvu9g0296 2297 PANTHER BNAC06G01580D PROTEIN 12 2296 - -
Pvu9g0296 2297 SUPERFAMILY Rudiment single hybrid motif 429 542 IPR011054 -
Pvu9g0296 2297 Gene3D - 1866 2266 - -
Pvu9g0296 2297 SUPERFAMILY ClpP/crotonase 1537 1863 IPR029045 -
Pvu9g0296 2297 Pfam Carbamoyl-phosphate synthase L chain, ATP binding domain 206 388 IPR005479 GO:0005524
Pvu9g0296 2297 Gene3D - 269 527 - -
Pvu9g0296 2297 SUPERFAMILY ClpP/crotonase 1867 2258 IPR029045 -
Pvu9g0296 2297 ProSiteProfiles Acetyl-coenzyme A (CoA) carboxyltransferase C-terminal domain profile. 1877 2192 IPR011763 GO:0016874
Pvu9g0296 2297 Pfam Biotin-requiring enzyme 717 782 IPR000089 -
Pvu9g0296 2297 Pfam Biotin carboxylase C-terminal domain 435 541 IPR005482 -
Pvu9g0296 2297 Coils Coil 1387 1407 - -
Pvu9g0296 2297 CDD biotinyl_domain 718 782 - -
Pvu9g0296 2297 Pfam Acetyl-CoA carboxylase, central region 783 1527 IPR013537 GO:0003989|GO:0005524|GO:0006633
Pvu9g0296 2297 Gene3D - 206 268 IPR013815 GO:0005524
Pvu9g0296 2297 SUPERFAMILY PreATP-grasp domain 19 161 IPR016185 -
Pvu9g0296 2297 Gene3D - 164 204 - -
Pvu9g0296 2297 SMART Biotin_carb_C_2 434 541 IPR005482 -
Pvu9g0296 2297 Coils Coil 2093 2113 - -
Pvu9g0296 2297 Pfam Carboxyl transferase domain 1629 2181 IPR034733 -
Pvu9g0296 2297 Gene3D Biotin dependent carboxylase carboxyltransferase 1685 1749 - -
Pvu9g0296 2297 Gene3D - 713 784 - -
Pvu9g0296 2297 ProSiteProfiles Acetyl-coenzyme A (CoA) carboxyltransferase N-terminal domain profile. 1534 1873 IPR011762 -
Pvu9g0296 2297 ProSiteProfiles Biotin carboxylation domain profile. 38 545 IPR011764 -
Pvu9g0296 2297 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 162 400 - -
Pvu9g0296 2297 Pfam Biotin carboxylase, N-terminal domain 39 158 IPR005481 -
Pvu9g0296 2297 Gene3D - 11 163 - -
Pvu9g0296 2297 Gene3D - 1535 1862 - -
Pvu9g0296 2297 ProSitePatterns Carbamoyl-phosphate synthase subdomain signature 2. 352 359 IPR005479 GO:0005524
Pvu9g0296 2297 ProSiteProfiles ATP-grasp fold profile. 191 383 IPR011761 GO:0005524|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0296 Pvu-Chr9 6358915 6373338 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0296 5 2297 Acyl Lipid Metabolism Gene Families AT1G36160 79.922 0.0 3836
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0296 K11262 - gmx:100778658 4290.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0296 9 6358915 6373338 Pvu9g0296 9 6358915 6373338 ECH