Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0276 ATGAGCAATCTGAGAACCCTGTGTAGACCTCAGACGGTGTTCTCTTTCATTAGTTGCAGACATCAATTTCGATCTAGGGTTTTGTTTCCAAACCCTAATTGCAAGTCTCGTCTAACCTCGCCGTTTCTGTACTCTACAATCGGTTCTTGGGGTTCGAATCCATGGTTTCGCGTGAATCAGAGGAGAACCGTAGCCAAGGCGTCGAATTGGGCTGAACAAAAATCCCCATATGAAACTCTTGAATTGGAAGGAGATGCTGATGAGGAGCAGATAAAAAATGCTTACAGACGCTTGGCCAAATTTTATCATCCAGATGTCTATGATGGCAGAGGAAACCTTGAAGAAGGTGAAACAGCAGAAGCTAGATTCATCAAGATTCAAGCTGCTTATGAATTACTTATAGATGGAGAGAGGCGAAGACAGTATGATGTTGATAACAGGGTCAACCCTATGAAGGCATCTCAGGCATGGATGGACTGGCTTATAAAAAAGGGAAAAGCTTTCGATCAGCGGGGTGACATGGCCATTGTTGCTTGGGCTGAACAGCAACAGCGCGAGTTAAATCTTCGCGTGCGTCAACTTTCTCATTCAAAGACTGATCCAGAGGAAGCCAGGAAGATTCTTGCAAGAGAAAAGAAGGCCTCGGCCGATTATTACTCGAACACCCTTAAAAGGCATACGCTTGTACTGAAGAAGAGAGATTTGATGCGCAGAAAGGCCGAGGAAGAAAAGAAGACCACTATCAGCAGGCTCTTGGCAGCAGAAGGTCTTGAACTTGATGATTCAGACAGTGACGAGGCACTCTAA 807 0.4511 MSNLRTLCRPQTVFSFISCRHQFRSRVLFPNPNCKSRLTSPFLYSTIGSWGSNPWFRVNQRRTVAKASNWAEQKSPYETLELEGDADEEQIKNAYRRLAKFYHPDVYDGRGNLEEGETAEARFIKIQAAYELLIDGERRRQYDVDNRVNPMKASQAWMDWLIKKGKAFDQRGDMAIVAWAEQQQRELNLRVRQLSHSKTDPEEARKILAREKKASADYYSNTLKRHTLVLKKRDLMRRKAEEEKKTTISRLLAAEGLELDDSDSDEAL* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0276 268 PRINTS DnaJ domain signature 77 95 IPR001623 -
Pvu9g0276 268 PRINTS DnaJ domain signature 95 110 IPR001623 -
Pvu9g0276 268 PRINTS DnaJ domain signature 118 138 IPR001623 -
Pvu9g0276 268 SUPERFAMILY Chaperone J-domain 23 142 IPR036869 -
Pvu9g0276 268 CDD DnaJ 76 135 IPR001623 -
Pvu9g0276 268 PANTHER LD30543P 56 266 - -
Pvu9g0276 268 Gene3D DnaJ domain 60 160 IPR036869 -
Pvu9g0276 268 PANTHER CO-CHAPERONE PROTEIN DJLA 56 266 - -
Pvu9g0276 268 SMART dnaj_3 74 138 IPR001623 -
Pvu9g0276 268 ProSiteProfiles dnaJ domain profile. 75 146 IPR001623 -
Pvu9g0276 268 Pfam DnaJ domain 76 143 IPR001623 -
Pvu9g0276 268 ProSitePatterns Nt-dnaJ domain signature. 123 142 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0276 Pvu-Chr9 6049086 6052114 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0276 - - vra:106762321 481.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0276 9 6049086 6052114 Pvu9g0276 9 6049086 6052114 ECH