Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0274 ATGGCGGAAAGTTTGGAACGCATCGACGTGAAGCTCTCTCCTGCGCCGGACAAAAGGATTCCGTTGATGAAATCAAGAGGTGGACGGCGCCGTGGCGACACGTGGGTAATTTCAGTGTTCGTCATAATCCAAATCGGAGTTTTCATAGCAACCATGCTCGTTAACGATTGCTGGACCAATTCTCACGGAGATTGCGTCCTGAAAGGTCTTGGAAGGTTCTCCTTCCAGCCTCTCACCGAGAATCCACACCTAGGTCCTTCTCAGTCCAAATTAGATGAAATGGGAGCTCTTCGATGGAGCCTTTTGACAGAGCAGCACCAAACTTGGCGTCTTTTCACATTTCCATTTTTGCACGCTGGACTCTTCCACCTGTTTCCAAATCTCTCCAATATCGTCTACGTGGGAGTTCACCTGGAGCGCGAATTTGGACCCATAAGGATTGGTATAATCTATGCATTGTCATCTTTTGTGGGAGCCTTGGTGGCTTCTCTTTTTCTCCAAAACACCCCCACTGTTGGTGCTTCCGGTGCTTTATATGGATTACTGGGAACATTGCTTTCCGAACTTGTTTGGAACTGGAAATTTCATACCAATAAGATTTCAGCAATAACAACATTAGTCTGTGTCTTTGTAAGCAACTTCGTCTATGGTTTTCTGCCTTATGTAGACAATTTTGCCAGCATAGGAGGTTTTATATCAGGATTCCTTCTTGGATCTGTTTTTCTACTCAGCCCTCAGCTCCAACCAGTAGCTCCAAATAAAGGAGGTCTTCTTGAGTATGGTGTCAAAAGTTACATCAAGTTAAAGTTGAAGAAAAAGCTGGACAGACCAGTTCTCAGGATTGTTTCTCTTATCCTCTTCGGCCTATTATTGGCCGGTTGTCTTGTGGGAGTTCTTCATGGAATCAACATCAACAGTTATTGCACATGGTGTCCATATGTAGACTGTATCCCTTTTCCAAGCTGGCACTGCAAAGACACAGAACCCTCTTGTGAGACAATGGTGAGCGATGCTCAGCTGACAATGACCTGTATCGGGAATGGCAACTTCAGGGTCTTTCCTTTTACCAACATTTCTCGGGCAAGGATGAATGATTTGTGCAATCTGATATGCTGA 1116 0.4498 MAESLERIDVKLSPAPDKRIPLMKSRGGRRRGDTWVISVFVIIQIGVFIATMLVNDCWTNSHGDCVLKGLGRFSFQPLTENPHLGPSQSKLDEMGALRWSLLTEQHQTWRLFTFPFLHAGLFHLFPNLSNIVYVGVHLEREFGPIRIGIIYALSSFVGALVASLFLQNTPTVGASGALYGLLGTLLSELVWNWKFHTNKISAITTLVCVFVSNFVYGFLPYVDNFASIGGFISGFLLGSVFLLSPQLQPVAPNKGGLLEYGVKSYIKLKLKKKLDRPVLRIVSLILFGLLLAGCLVGVLHGININSYCTWCPYVDCIPFPSWHCKDTEPSCETMVSDAQLTMTCIGNGNFRVFPFTNISRARMNDLCNLIC* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0274 371 PANTHER RHOMBOID-LIKE PROTEIN 8 14 371 - -
Pvu9g0274 371 Gene3D - 30 244 IPR035952 -
Pvu9g0274 371 SUPERFAMILY Rhomboid-like 32 246 IPR035952 -
Pvu9g0274 371 Pfam Rhomboid family 104 244 IPR022764 GO:0004252|GO:0016021
Pvu9g0274 371 PANTHER RHOMBOID-RELATED 14 371 IPR002610 GO:0004252|GO:0006508|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0274 Pvu-Chr9 6035595 6038297 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0274 - - gmx:100793747 599.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0274 9 6035595 6038297 Pvu9g0274 9 6035595 6038297 ECH