Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu9g0272 | AGTCCATTTGATTACTGTGATATTGTAACGTCAACTACTCACAAAAGTCTCCGAGGTCCAAGGGGAGGTATCATCTTTTATAGAAGGGGGGCAAAACCGAGGAGGCAAGGTTTTGTTCTTAATCATGGAGACGATAGTAATTATGATTTTGAGGAGAAAATAAACTTTGCTTTGTACCCATCATTACAAGGAGGCCCCCATAATAATCATATTGCTGCTCTTGCCATAGCTTTAAAACAAGTTGCAACTCCTGAGTACAAAGCGTACATGCAGCAGGTGAAGAGAAATGCGCAGTCATTAGCCTCGGCCTTGTTGAGAAGAAATTTCAGATTGGTGACAGGTGGGACCGACAATCATCTTTTGCTATGGGATCTAACAGCACTTGGTTTAATTGATAGAAACTATGAAAAGGTTTGTGAGGCGTGTCACATCACTCTCAATAAATGTGCCATTTATGGTTCCATTTCTCCTGGAGGAGTGAGAATTGGTACTCCTGCAATGACATCAAGAGGCTGTTTAGAGGAAGATTTTGAGACCATATCTGATTTTCTTCTGAGGGCAGCTCAGATTACCAGCATTGTGCAAAGGGAACATGGGAAATCATGCAAAGATTTTCTCAAGGGTCTTGAGAATAATAAAGATATTTCTGAGCTTAGAAATCGGGTTGAGACATTCAGTTCCCAGTTTGCAATGCCAGGATTCGATACTTGA | 711 | 0.4107 | SPFDYCDIVTSTTHKSLRGPRGGIIFYRRGAKPRRQGFVLNHGDDSNYDFEEKINFALYPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKRNAQSLASALLRRNFRLVTGGTDNHLLLWDLTALGLIDRNYEKVCEACHITLNKCAIYGSISPGGVRIGTPAMTSRGCLEEDFETISDFLLRAAQITSIVQREHGKSCKDFLKGLENNKDISELRNRVETFSSQFAMPGFDT* | 237 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu9g0272 | 236 | PANTHER | SERINE HYDROXYMETHYLTRANSFERASE 7 | 1 | 236 | - | - | |
| Pvu9g0272 | 236 | PANTHER | SERINE HYDROXYMETHYLTRANSFERASE | 1 | 236 | IPR001085 | GO:0004372|GO:0019264|GO:0030170|GO:0035999 | |
| Pvu9g0272 | 236 | SUPERFAMILY | PLP-dependent transferases | 1 | 235 | IPR015424 | - | |
| Pvu9g0272 | 236 | ProSitePatterns | Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. | 7 | 23 | IPR019798 | GO:0030170 | |
| Pvu9g0272 | 236 | Pfam | Serine hydroxymethyltransferase | 1 | 183 | IPR039429 | - | |
| Pvu9g0272 | 236 | Gene3D | - | 1 | 87 | IPR015421 | GO:0003824 | |
| Pvu9g0272 | 236 | Gene3D | Aspartate Aminotransferase, domain 1 | 88 | 236 | IPR015422 | GO:0003824 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu9g0272 | Pvu-Chr9 | 6013806 | 6016772 | Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pvu9g0272 | K00600 | - | gmx:100793208 | 465.307 |
Event-related genes