Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0270 ATGGCTACCTTTCTCTCCAATCAATCTCTGTTGGCTTCTTGTCCATGTTCTACTCCCTTCTCTTCTAAGCCCTTTCAAACCCTAAAACCCAAAATCATATCTTTTCCATTTCGGGGGTTTCCACGCCCTCTAAATTCCTCTCTCAATCGAAGAACCCCATTAAAGTATTCTCAAGATTCCCCTCCAACTAGAAATGATGAGACAGGTGAGACCCGGAAAGATTTAAGAGGGATAGACGGTGATGAAGATAAAAAGCCATTACCCAGTTTAATGGTCCTCCTTGAAGCATACAAGGAAGCCTTTTTTAATGGTGATGAAAATGTTGTTGCTCTGATTGAAGAGAAAATATATTCAGAACTAAATAGAAAAAATAAATTGATTCAGAAAGTATCAAGTTTATCAGCAGACAAAGCTACTTCCAAGGATAGATATTTTCGATTACAAGCTGATTTTGACAATTTTAGGAAAAGATTTGACAAAGAAAGACTTAGCATCCAATCTGATGCCCAACAAGAACTCATTGAAAAGCTTTTGTTGATGGTGGACAGTTTTGAGAAAACAAAACAGCATATTAAAGCAGCAACAGAGAAAGAGAAGAAAATTGATGTTAGCTATCAAGGCATTTACAAGCAATTTGTAGAGATTCTGAGGAGTCATCATGTTTCAGTGGTAGCAACAGTGGGCAAGCCGTTTAATCCCTTGCAACATGAAGCCATTGCACGTGAGGAGTCAACAGAGTTCAAGAAAGGGATTATAATTAAAGAATCCCGACGTGGTTTCTTGCTCAGAGATCGAGTTCTAAGGCCAGCCCTCGTGAAGGTTTCATTAGGTCCTGGAACTAAGAAATCTCCACTGTCTCCTGACAACTCCATGGAGCAACCTTCAACAGCTGCTGGAATAGATGAAAGATAG 912 0.3936 MATFLSNQSLLASCPCSTPFSSKPFQTLKPKIISFPFRGFPRPLNSSLNRRTPLKYSQDSPPTRNDETGETRKDLRGIDGDEDKKPLPSLMVLLEAYKEAFFNGDENVVALIEEKIYSELNRKNKLIQKVSSLSADKATSKDRYFRLQADFDNFRKRFDKERLSIQSDAQQELIEKLLLMVDSFEKTKQHIKAATEKEKKIDVSYQGIYKQFVEILRSHHVSVVATVGKPFNPLQHEAIAREESTEFKKGIIIKESRRGFLLRDRVLRPALVKVSLGPGTKKSPLSPDNSMEQPSTAAGIDER* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0270 303 MobiDBLite consensus disorder prediction 282 296 - -
Pvu9g0270 303 SUPERFAMILY Head domain of nucleotide exchange factor GrpE 222 276 IPR009012 GO:0006457
Pvu9g0270 303 MobiDBLite consensus disorder prediction 45 64 - -
Pvu9g0270 303 MobiDBLite consensus disorder prediction 44 82 - -
Pvu9g0270 303 MobiDBLite consensus disorder prediction 276 303 - -
Pvu9g0270 303 CDD GrpE 141 274 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Pvu9g0270 303 MobiDBLite consensus disorder prediction 65 82 - -
Pvu9g0270 303 Hamap Protein GrpE [grpE]. 65 276 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Pvu9g0270 303 Pfam GrpE 117 275 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Pvu9g0270 303 PANTHER GRPE PROTEIN HOMOLOG 1 293 - -
Pvu9g0270 303 Gene3D - 110 217 IPR013805 -
Pvu9g0270 303 PRINTS GrpE protein signature 145 161 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Pvu9g0270 303 PRINTS GrpE protein signature 173 188 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Pvu9g0270 303 PRINTS GrpE protein signature 228 243 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Pvu9g0270 303 PRINTS GrpE protein signature 255 274 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Pvu9g0270 303 ProSitePatterns grpE protein signature. 231 274 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Pvu9g0270 303 Gene3D Head domain of nucleotide exchange factor GrpE 221 275 IPR009012 GO:0006457
Pvu9g0270 303 PANTHER GRPE PROTEIN 1 293 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Pvu9g0270 303 SUPERFAMILY Coiled-coil domain of nucleotide exchange factor GrpE 125 219 IPR013805 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0270 Pvu-Chr9 5997523 6002623 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0270 K03687 - gmx:100809893 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0270 9 5997523 6002623 Pvu9g0270 9 5997523 6002623 ECH