Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0259 ATGTCGAGCATCGTCAAGGAGATCCTGGCGAGCCCGATACAAATGGCGGACCAGGTATCCAAGATGGCGGAGGAGGCCCAGAATTTCCGACAGGAATGTCTCGAGGTCAAATCCAAAACGGAGAAACTCGCAGGGCTCCTCCGTCAGGCCGCGAGGAACAGCAACGACCTATACGAGCGTCCCACGCGCCGCATTATCGACGACACCGAACAAGTCTTGGACAAGGCCCTCGTACTAATCACCAAATGCCGCGCCAACGGTCTCATCAAAAGACTCTTCACCATCATCCCCGCCACCGCCTTTCGCAAGACCAGTATGCAGCTTGAGAATTCGGTCGGCGACGTCCAGTGGCTCCTACGCGTATCCGCGTCCGCCGACGAGCGTGACGACGAGTACCTCGGGCTCCCCCCCATCGCCGCCAACGAACCCATCCTCTGCCTAATATGGGAACAGGTCGCCATTCTCCTCTCTGGCGCCTCCTTGGATGATCGCTCCGACGCCGCCGCTTCCTTGGTTTCGCTCGCTCGCGACAATGACCGGTACGGGAAACTGATCATCGAAGAAGGTGGTGTGCCCCCGCTGTTGAAGCTTCTCAAGGAAGGACAAATGGAAGGGCAGGAGAACGCTGCCAGAGCCATTGGGCTTCTCGGGAAAGACCCTGAAAGCGTGGAACACATTGTGAATGCCGGTGTTTGTTCCGTGTTTGCCAAAATCCTGAAAGACGGTCACATGAAGGTTCAAACGGTGGTGGCCTGGGCTATTTCCGAACTCTGCGCCAATCATCCGAAATGCCAGGATCATTTCTCCCAGAACAATGCCATACGCTTGCTCGTTAGCCATCTCGCCTTCGAGACAATCCAAGAGCATAGCAAGTACGCTATTGCGAACAAGCACAAGTCCCTTCACACGTTAGTTTTGGAGAGTAATGCACAGAACGTGCATGACGAGGATGATGATCATAAGCACATTGGCATTAATCAGCTGGGGGCTACGACAGGCACTCAGATGCAAAACGTGGTCTCCAACACCATGGCCATGAAGGCCATTGCCCAAGGAAATAATGCCACTGCCACTGCCATTGGTAACCCCAACAGCACCGCTACAAACGCCAAAAAACAACAGCAGAGTGGGGCCCCGCACGTGTCAATCGCTGGGACGAGTATCAAGGGGAGGGAATTCGAAGACCCGTTGACAAAGGCAGAGATGAAGGCGATGGCAGCTAGAGCCTTATGGCAACTGGCGAGGGGGAACTTGACTGTGTGTAGGAGCATAACCGAGTCAAGGGCTCTTTTGTGTTTCGCGGTTTTGCTCGAAAAGGGTCCTGAAGACGTGCAATCTTATTCCGCAATGGCGTTGATGGAAATAACTGCCGTGTCGGAGCAACATTCAGAGCTGAGACGCTCTGCTTTCAAACCCACCTCCCCCGCTGCAAAGGCTGTTCTGGAGCAGCTTCTTAAAGTGATAGAAAATGAACAAATTGACCTGCTCATACCTTGCATCAGATCCGTTGGTAATTTGGCGAGAACTTTCAGAGCTACGGAAACAAGACTGATTGCGCCATTGGTGAAGCTCCTTGACGAAAGAGAAGCCCATGTATGCATGGAAGCGGCCATTGCGCTCAACAAGTTTGCTTGCACGGACAACTACCTCCACGAGAATCACTGCAACGCCATCATAGATGCTGGTGGCGCCAAGCACTTGATTCAACTGGTTTACTTTGGGGAGCAAATGGTTCAGATGCCTTCTGTCACTCTCCTTTGTTACATAGCGCTTCACGTTCCGAAGAGCGAGACGCTGGCGCAAGAAGAGGTTCTGATAGTTCTGGAGTGGTGCACGAAGCAGGCACATCTGGTGGATGATCACAACATTGAACAACTGCTACCAGAAGCCAAGAGTAGGCTCGAACTGTATCAATCAAGAGGAAGAGGATTCCGCTGA 1938 0.5304 MSSIVKEILASPIQMADQVSKMAEEAQNFRQECLEVKSKTEKLAGLLRQAARNSNDLYERPTRRIIDDTEQVLDKALVLITKCRANGLIKRLFTIIPATAFRKTSMQLENSVGDVQWLLRVSASADERDDEYLGLPPIAANEPILCLIWEQVAILLSGASLDDRSDAAASLVSLARDNDRYGKLIIEEGGVPPLLKLLKEGQMEGQENAARAIGLLGKDPESVEHIVNAGVCSVFAKILKDGHMKVQTVVAWAISELCANHPKCQDHFSQNNAIRLLVSHLAFETIQEHSKYAIANKHKSLHTLVLESNAQNVHDEDDDHKHIGINQLGATTGTQMQNVVSNTMAMKAIAQGNNATATAIGNPNSTATNAKKQQQSGAPHVSIAGTSIKGREFEDPLTKAEMKAMAARALWQLARGNLTVCRSITESRALLCFAVLLEKGPEDVQSYSAMALMEITAVSEQHSELRRSAFKPTSPAAKAVLEQLLKVIENEQIDLLIPCIRSVGNLARTFRATETRLIAPLVKLLDEREAHVCMEAAIALNKFACTDNYLHENHCNAIIDAGGAKHLIQLVYFGEQMVQMPSVTLLCYIALHVPKSETLAQEEVLIVLEWCTKQAHLVDDHNIEQLLPEAKSRLELYQSRGRGFR* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0259 645 Gene3D - 3 121 IPR036537 GO:0007166
Pvu9g0259 645 PANTHER ARMADILLO REPEAT ONLY 1 1 644 - -
Pvu9g0259 645 MobiDBLite consensus disorder prediction 366 382 - -
Pvu9g0259 645 Pfam Armadillo/beta-catenin-like repeat 219 259 IPR000225 GO:0005515
Pvu9g0259 645 Pfam Armadillo/beta-catenin-like repeat 184 214 IPR000225 GO:0005515
Pvu9g0259 645 PANTHER ARMADILLO REPEAT ONLY 4 1 644 - -
Pvu9g0259 645 SMART arm_5 417 457 IPR000225 GO:0005515
Pvu9g0259 645 SMART arm_5 177 218 IPR000225 GO:0005515
Pvu9g0259 645 SMART arm_5 219 259 IPR000225 GO:0005515
Pvu9g0259 645 SMART arm_5 551 591 IPR000225 GO:0005515
Pvu9g0259 645 MobiDBLite consensus disorder prediction 366 389 - -
Pvu9g0259 645 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 189 231 IPR000225 GO:0005515
Pvu9g0259 645 Gene3D - 388 628 IPR011989 -
Pvu9g0259 645 SUPERFAMILY ARM repeat 155 610 IPR016024 -
Pvu9g0259 645 Gene3D - 150 316 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0259 Pvu-Chr9 5852398 5854335 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0259 - - vun:114164601 1092.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0259 9 5852398 5854335 Pvu9g0259 9 5852398 5854335 ECH