Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0247 ATGGCTAATACGGCACCGTCTCCTGCAATTCTCCTCTTCCTTCCTCTATTCTTCTCCCTCGCTAACTCCCAATCTTTCATAGGAGTGAATTACGGCCAGGTCGCCGACAACCTTCCGCCGCCGGACTCCACGGCCGGTCTTCTCAAATCCACCTCCATCGGAAAAGTCCGCCTCTACGGCGCTGATCCCGCCATCATCAAGGCCCTTGCCAATTCCGGCATCGGAATCGTCATCGGCGCCGCCAACGGCGACATTCCCAGTCTGGCCTCCGATCCCAACGCGGCCACTCAGTGGGTTAACGCGAACGTGTTACCCTACTACCCCGCCAGCAACATCACTCTCATCACCGTCGGCAACGAGATTTTGACCTTGGCCGACCAGAGTCTTGTCTCGCAGCTCGTGCCGGCGATGCGAAATCTCCAGAATGCCCTCAACGCGGCTTCTGTGAAGATCAAGGTCTCCACGGTGCACTCCATGGCCGTGTTAACTCAGTCGGATCCGCCGTCGTCCGGGCTGTTCAACCCGGCGCTCCAGAACACGCTGAAACAGTTGCTGGCGGTTCTGAAGGATAACAAATCGCCGTTCACGATCAACCCGTACCCGTTCTTCGCCTACCAGAGCGACACGAGACCCGAAACGCTGGCGTTTTGCCTCTTCCAACCCAACTCGGGCCGGGTCGACTCGGGCAATGGAAAGCTCTACACGAACATGTTCGATGCCCAGGTTGATGCTGTACATTCTGCTTTGAGTGCGATGGGCTTCCAGGACATCGAGATTGTGGTTGCTGAGACTGGATGGCCCTCACGTGGTGACAGTAACGAAGTAGGACCCAGTCTTGAAAATGCAAAGGCCTTTAACGGGAACCTGATTAATCATCTTAGATCATTGGTTGGGACACCTTTGATGCCTGGGAAGTCTGTGGACACTTACATTTTTGCACTCTATGATGAGGATCTCAAACCCGGTCCAGGATCTGAACGCGCGTTTGGGCTGTTCAAAACTGATGGTACCATGGCATACGATGCTGGCTTAGCCAAGTCTAGCCAGCAGACTCCATCAACTAGTCCAAAGACTCCGGTTACTCCAGCACCCAACACTTCTGGATGGTGTGTACCCAAAGCTGGAATTTCTGATGATCAGTTGCAGGCCAATATTGACTACGCATGTAGCCAAGGCATAGATTGCGGACCAATTCAACCAGGAGGTGCTTGTTTTGAGCCTAACACAGTAGCATCCCATGCTGCATTTGCCATGAATCTCTACTACCAAACATCTGCCAAAAATCAATGGAACTGTGACTTCTCCCAATCAGCAACACTAACATCCCAAAATCCCAGTTACAATGCTTGCATATACTCTGGTGGGGGCAACTGA 1374 0.5306 MANTAPSPAILLFLPLFFSLANSQSFIGVNYGQVADNLPPPDSTAGLLKSTSIGKVRLYGADPAIIKALANSGIGIVIGAANGDIPSLASDPNAATQWVNANVLPYYPASNITLITVGNEILTLADQSLVSQLVPAMRNLQNALNAASVKIKVSTVHSMAVLTQSDPPSSGLFNPALQNTLKQLLAVLKDNKSPFTINPYPFFAYQSDTRPETLAFCLFQPNSGRVDSGNGKLYTNMFDAQVDAVHSALSAMGFQDIEIVVAETGWPSRGDSNEVGPSLENAKAFNGNLINHLRSLVGTPLMPGKSVDTYIFALYDEDLKPGPGSERAFGLFKTDGTMAYDAGLAKSSQQTPSTSPKTPVTPAPNTSGWCVPKAGISDDQLQANIDYACSQGIDCGPIQPGGACFEPNTVASHAAFAMNLYYQTSAKNQWNCDFSQSATLTSQNPSYNACIYSGGGN* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0247 457 MobiDBLite consensus disorder prediction 344 364 - -
Pvu9g0247 457 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 7 17 449 - -
Pvu9g0247 457 Pfam X8 domain 369 439 IPR012946 -
Pvu9g0247 457 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 17 449 IPR044965 GO:0004553|GO:0005975
Pvu9g0247 457 SMART X8_cls 368 452 IPR012946 -
Pvu9g0247 457 Gene3D - 364 453 - -
Pvu9g0247 457 ProSitePatterns Glycosyl hydrolases family 17 signature. 257 270 IPR000490 GO:0004553|GO:0005975
Pvu9g0247 457 Pfam Glycosyl hydrolases family 17 27 341 IPR000490 GO:0004553|GO:0005975
Pvu9g0247 457 Gene3D Glycosidases 26 351 - -
Pvu9g0247 457 SUPERFAMILY (Trans)glycosidases 27 342 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0247 Pvu-Chr9 5607916 5611925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0247 21 457 Miscellaneous Gene Families AT2G16230 65.604 0.0 601
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0247 - - gmx:100778892 797.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0247 9 5607916 5611925 Pvu9g0247 9 5607916 5611925 ECH