Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0243 ATGAGTTCCGACATGAACACCAACACCAACACGACCACGAACACGAACACAACCTCGAAGGAGTCGAAAAAGAGGTTACCGGATTTCGTGCAGAGCGTGAAGCTGAAGTATGTGAAACTGGGGTACCACTACCTGATGTCACACCTGGTAACCCTGTGCCTGCTACCTCTGATGTCCGTAATCCTCATCCAAGCCTCTCAGATGAAGACGCAGGACATTCAGGAGCTGTGGGCCCACCTACAGTACAACCTCCTCAGCGTCATCGCTATATCCGCCATCCTCGCCTTGGGATCCACCCTCTACATCATGACCCGCCCCACCTCCATCTACCTCATCGACTACTCCTGCTACCGTCCCCCCCACCACCTCCGCGTCCACTTCCAAAAGTTCCTCCACCACTCCACCCTCACCGGCGACTTCCTCCCCTCTTCCCTCGATTTCCAGCGCAAGATTCTCCAACGCTCCGGCCTCGGCGAGGAAACCTATCTCCCCGAGGCCATGCACTCCATCCCCCCGCGCCCCTCCATGGACGCCGCCAGGGAAGAGGCCGAGCAAGTCATGTTCGGCGCCCTCGACAACCTCTTCGCCAACACCCGCGTCAAGCCCAAGGACATCGGAATCCTCGTCGTCAATTGCAGCCTCTTCAACCCCACGCCCTCCCTTTCTGCCATGATCGTCAACAAGTACAAGCTCCGTGGCAATGTCAAAAGCTTCAACCTTGGCGGCATGGGCTGCAGCGCCGGCGTCATCGCCATCGATCTCGCCAAAGACATGCTTCAGGTCCACCGCAACACTTACGTTGTCGTCGTCAGCACCGAGAACATAACTCAGAATTGGTACTTCGGGAACAACAAGGCCATGTTGATACCCAATTGCCTCTTCCGCGTTGGTGGGGCCGCCATTCTCCTGTCCAACAAAAGCTCCGATAAAAGACGAGCCAAATACAAGCTTTTGCATGTGGTGAGGACTCACAAAGGGGCGGATGACAAGGCCTTCAGGTGCGTGTACCAGGAACAAGACGATATCGGAAAAACCGGCGTGTCTCTGTCGAAGGACCTCATGGCAATTGCGGGTGGAGCTCTTAAGACTAACATAACCACTTTGGGTCCCCTTGTGTTGCCTATAAGTGAGCAACTTCTCTTCTTTCTCACACTTGTTTTGAAAAAGCTTTTCAACGCCAAGATGAAGCCTTACATCCCTGATTTCAAGCTCGCGTTTGACCATTTCTGCATTCACGCTGGTGGGAGGGCTGTGATTGATGAGTTGGAGAAGAATCTGCAGCTTCTGCCGCTGCATGTGGAGGCTTCGAGGATGACGCTGCACAGGTTCGGGAACACCTCATCGAGTTCAATTTGGTACGAGTTGGCTTACACGGAGGCGAAGGGAAGGATGAGAAAGGGGAACAGAGTGTGGCAGATTGCGTTTGGGAGTGGGTTCAAGTGCAACAGTGCGGTGTGGGAAGCCCTCAGACATGTGAATCCCTCACCCAAGAGTCCCTGGGAAGATTGCATTCATAAGTACCCAGTTCAGATTCTGTAG 1539 0.5419 MSSDMNTNTNTTTNTNTTSKESKKRLPDFVQSVKLKYVKLGYHYLMSHLVTLCLLPLMSVILIQASQMKTQDIQELWAHLQYNLLSVIAISAILALGSTLYIMTRPTSIYLIDYSCYRPPHHLRVHFQKFLHHSTLTGDFLPSSLDFQRKILQRSGLGEETYLPEAMHSIPPRPSMDAAREEAEQVMFGALDNLFANTRVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNVKSFNLGGMGCSAGVIAIDLAKDMLQVHRNTYVVVVSTENITQNWYFGNNKAMLIPNCLFRVGGAAILLSNKSSDKRRAKYKLLHVVRTHKGADDKAFRCVYQEQDDIGKTGVSLSKDLMAIAGGALKTNITTLGPLVLPISEQLLFFLTLVLKKLFNAKMKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPLHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRKGNRVWQIAFGSGFKCNSAVWEALRHVNPSPKSPWEDCIHKYPVQIL* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0243 512 CDD CHS_like 91 486 - -
Pvu9g0243 512 MobiDBLite consensus disorder prediction 1 20 - -
Pvu9g0243 512 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 406 487 IPR013747 -
Pvu9g0243 512 PANTHER 3-KETOACYL-COA SYNTHASE 4 17 511 - -
Pvu9g0243 512 PIRSF Very_long_ch_3-ktacl-CoA_syn 28 512 IPR012392 GO:0006633|GO:0016020|GO:0016747
Pvu9g0243 512 MobiDBLite consensus disorder prediction 1 23 - -
Pvu9g0243 512 SUPERFAMILY Thiolase-like 97 312 IPR016039 GO:0016746
Pvu9g0243 512 SUPERFAMILY Thiolase-like 317 490 IPR016039 GO:0016746
Pvu9g0243 512 Gene3D - 143 488 IPR016039 GO:0016746
Pvu9g0243 512 Pfam FAE1/Type III polyketide synthase-like protein 101 390 IPR013601 GO:0006633|GO:0016020|GO:0016747
Pvu9g0243 512 PANTHER 3-KETOACYL-COA SYNTHASE 17 511 IPR012392 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0243 Pvu-Chr9 5446777 5449038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0243 24 511 Miscellaneous Gene Families AT1G19440 80.943 0.0 857
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0243 K15397 - egr:104418843 863.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0243 9 5446777 5449038 Pvu9g0243 9 5446777 5449038 ECH