Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0200 ATGAGGGCGGAGATGAAGCATGAAGCTCAAGCTGTGGTGAATAATATTTGTAACACCGGCAAGTTCTCACAACTCCTTGCTTCCCAAGATCGTGATTATCTTCTCTCTCCAACTGGGTCTCAGGTGAAGGTTTCTGATCTTGAAGGGAAAGTAGTGGGTCTATTATTCGCTGCGAATTGGTACCCACCATGCCGCGGATTCACCCAAGTGCTAGTTGGAATCTACGAGGAGTTGAAAAGCAGTTTTCGTGAATTTGAGATTGTGTATGTGTCCTCTGACGAGGACTTGGATGCCTTCAGCAGCTTCTATGGAAACATGCCGTGGCTGGCAATTCCGTTCTCTGATTTAGAAACAAAGAAATCCTTGACCAGAAAGTATGACGTGGAAGGCATTCCATGCTTGATTTTTTTGCAACCTCAGGATCGTAAAGATCAGGCAACAGTTCGTGACGGAGTTGAACTTATTTACCGTTATGGAGTTCAAGCTTACCCATTCTGTAACGAGAGGTTGGAGCAGCTGCGAAAGGAAGACAAAATCAAGCGTGAAAACCAGACCCTCCTTAATTTACTATCAAACCGTCATAGAGACTATGTTTTGAGCCACACTCACTTCGGACTGAAACAGGTACCTCTTGCTTCTCTAGTGGGAAAAACAATTGCACTCTACTTCTCCGCCGAATGGTGCGTGCCATGCGCCAAGTTCACTCCCAAACTGATTTCCGTTTACGAGAAGATTAAGCAGGAGCTAGCCGAGAAGGGAGAGGAAGACTTCGAAGTGGTGCTGGTATCCAGCGACCGTGACAAAGCATCCTTTGACTCCTACTACAGCAGCATGCCTTGGTTAGCCTTGCCTTTTGGCGACACGGAGACGAAGAACCTCGTACGACACTTCAACGTGCAAGGGATTCCTTGGTTGGTGATCATAGGCCCTGATGGTAAAACAATAACAGTGCATGGTAGGAGCTTGATAAACTTGTACCGAGAGAACGCTTACCCTTTCACGAACGCCAAAGTGGAGGAGCTCGAAAAACAGCTTGAGCAAGAGGCGAAGGATCTTCCGGCATTGGTATATCATGAAGGGCATGGGCATGACCTGAATTTGGTGTCAGATGGGAACGGTGGAGGACCCTTTATCTGCTGTGTGTGCGATGAACAGGGCTCTAATTGGGCCTACCAGTGTCTCCAATGTGGTTATGAAGTTCACCCCAAATGCGTCAGATCTGTGGATCGTCACAACAGTTTGTTAATTGCTAATTAA 1257 0.4694 MRAEMKHEAQAVVNNICNTGKFSQLLASQDRDYLLSPTGSQVKVSDLEGKVVGLLFAANWYPPCRGFTQVLVGIYEELKSSFREFEIVYVSSDEDLDAFSSFYGNMPWLAIPFSDLETKKSLTRKYDVEGIPCLIFLQPQDRKDQATVRDGVELIYRYGVQAYPFCNERLEQLRKEDKIKRENQTLLNLLSNRHRDYVLSHTHFGLKQVPLASLVGKTIALYFSAEWCVPCAKFTPKLISVYEKIKQELAEKGEEDFEVVLVSSDRDKASFDSYYSSMPWLALPFGDTETKNLVRHFNVQGIPWLVIIGPDGKTITVHGRSLINLYRENAYPFTNAKVEELEKQLEQEAKDLPALVYHEGHGHDLNLVSDGNGGGPFICCVCDEQGSNWAYQCLQCGYEVHPKCVRSVDRHNSLLIAN* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0200 418 Pfam Thioredoxin-like 216 313 IPR012336 -
Pvu9g0200 418 Pfam Thioredoxin-like 49 140 IPR012336 -
Pvu9g0200 418 SUPERFAMILY Cysteine-rich domain 350 407 IPR046349 -
Pvu9g0200 418 PANTHER THIOREDOXIN 19 404 - -
Pvu9g0200 418 SUPERFAMILY Thioredoxin-like 34 142 IPR036249 -
Pvu9g0200 418 Coils Coil 331 351 - -
Pvu9g0200 418 Gene3D Glutaredoxin 25 166 - -
Pvu9g0200 418 Gene3D Glutaredoxin 200 335 - -
Pvu9g0200 418 SUPERFAMILY Thioredoxin-like 197 318 IPR036249 -
Pvu9g0200 418 ProSiteProfiles Thioredoxin domain profile. 188 350 IPR013766 -
Pvu9g0200 418 ProSiteProfiles Zinc finger phorbol-ester/DAG-type profile. 362 412 IPR002219 -
Pvu9g0200 418 Pfam C1 domain 361 405 IPR004146 -
Pvu9g0200 418 ProSiteProfiles Thioredoxin domain profile. 24 157 IPR013766 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0200 K17609 - gmx:100808125 737.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0200 9 3737048 3743320 Pvu9g0200 9 3737048 3743320 ECH