Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0125 ATGGCGGCTCCTAACATGGATCAGTTCGAAACGTATTTCAGGAGAGCAGATTTGGACGGAGATGGCAGAATCAGTGGAGCTGAAGCCGTCTCTTTCTTCCTGGGATCCAATTTGCCCAAACAAGTTCTCGCCCAGGTATGGGCGTATGCTGATCAGGCCAAAACTGGTTTCCTTGGGCGCGCAGAGTTTTTTAATGCTCTGAGGTTAGTTACTGTGGCTCAGAGTAGGCGAGATTTAACGCCTGACATTGTGAAGGCAGCGTTATATGGTCCTGCTGCTGCTAAAATCCCCGCGCCGCAGATTAATCTTGCTGCCGTATCTCAACCTGTCCCGAGGCCCTCTGCTGGATCTGTTGGACAGATGGGTGTTACTGGACCCAATTCAGCTCAAGGTTTTGCCTATAGAGGACAAGGGTTAGCAGGTCCTGGTGCAAGCCCGCAATATTATCCTCCACAGCAGAATCCTGCCATCAGACCTCATCAATCAATGCCTGTTACCGGTGCTGCGCGTCCGCAACAGGGTGTTGCAGGCCCTGATATTTCTAGAGGAGTTAACATGGGTGGTCACAATTTCTCAAATCCTGGGCTATCAAATGATTGGAATAATGCTAGGCCTGGTATGGTGGCTACCAGACCTCCAGGAATGAACCCGTCAGCTGCCTTCCAGACGTCACAGTCTCCAATTTCACCAATGCCCCAGTCATCTCCAATTTCACCAATGCCCCAGTCATCCCCAATTTCACCAATGCACCAGTCATCTCCACTTTCATCAATGCCCCAATCATCTCCACTTTCACCAATGCCCCAGTCATCTCCGGTCTCATCAATACCCCAGTCATCTCCGGTCTCATCAATGCCCCAGTCAACAGCTGTTAACGCTAAATCATTGGGTGTTTCTGGAAATGGGTTCTCTTCCAATTCAGTTTTGGGCAATGATTTCTTCTCTGCTGCCTCATCAATATCGAAACAAGAACCTGCTGGACACAGTTATTCTGTTACCAATGTCTCATCAGCCATTGTTCCTGTTTCCACTGGTCCCCAACCTGTAAAGAAGCAAAATTCACTTGACTCATTGCAGAGTGCATTCTCATCAGTGCTGCCTGCAAATAGTCCGTTTCATCGGCCACAGTCTGTATCAAACCAGCAAATTTCACCACAAGCTTCTTCTTCTCCACATACACCATCTGGGATGACAGGTGGGGTTGGAAATGCAAATTCTGACAATGTGCAGCTTTCTTGGCCAAAAATGAAGCCTACTGATGTGCAGAAGTATACAAAGGTGTTTTTGGAAGTTGACACTGACAGGGATGGGAAGATCACTGGGGAGCAGGCTCGCAGCCTTTTTTTAAGCTGGAGATTACCAATAGAGGTGTTAAAGAAGGTGTGGGACTTGTCTGATCAGGACAATGATAGCATGCTTTCTTTGAAGGAGTTTTGCTTTGCTCTTTATTTGATGGAACGGTACAGGGAAGGTCGACCTCTTCCACAGTCTCTTCCAAGCAATGTTATGTTTGATGAGACACTGATGTCTATGACAGGCCAACCAAAAATTGTTCCTGGAAATGCAACCTGGGGAACCGGCCAAGGTTTTCAGCAACAACAGGGGATGCCAGGTGCTCGGCCAGTGGCACCAACAGCTGGTTTGAGGCCTCCAGTCCATGGAAGTTCTGCTCAGGCTGATTTCACTACACAGCCCAACCAGCAAAAGTCAGGAACACCTGTGTTGGAGGATTCCTTTCTGAATCGCACTGATAATGGTGAGCAGAATATATTGAATACAAAGCCTCAAGATGCAACAACTGCAGAGAAGAAGTCTGAAGAAGCTCAGAATGTTATTTTGGATTCAAAAGAGAAGATGGAGCTTTACCGGAACAAAATGCAGGAACTGGTTCTATATAAAAGCAGATGTGATAATCGATTAAATGAGATAACAGAAAGGGCATCTGCGGATAAGCGCGAGGCAGAATCATTGGGCAAGAAATATGAAGAGAAATACAAACAAGTAGCAGAAATAGCATCAAAATTGACTGTTGAAGAAGCTAAATTTCGTGATGTCCAGGAAAGGAAGGTGGAATTGCAGCAAGCCATCGTCAAAATTGAACAAGGAGGTAGTGCAGATGGCATTCTTCAGGTCCGTGCTGAACGCATACAGTCAGATCTGGAGGAGTTATTTAAGGCTCTAGCTGATCGGTGCAAGAAACATGGGATGGATGTGAAGTCAATTGCAATGGTTCAGCTTCCTTCTGGTTGGCAACCTGGAATTCCAGAGGGAGCTGCTCTTTGGGATGAAGATTGGGATAAATTTGAGGACGAAGGATTTGGCAATGATCTTACTTTTGACACTAAAAATGCATCTTCAAAACCAAAGCCAGCATTTATTGACGGAGAACAAAATTTCTCTGATGATAATTCTATTCATGGTTCACCTGTGAATGCAAATGGGAAGCAAGAAAATTCTGCTAACGGTGATTATACAGTTGAGGATGAATCCTATGCACATAGTGAAGAAGACTTGGCCAGAAGCCCTCACGATAGTCTAGCTGGGAGGAGTACCGTGGAGAGTCCTTCTCAAGACTTCTCAAATCCTCACTTTGGAAAAGGTTCTGAAGCAGATGCAGAAACACATAGAAGTTTTGATGAATCGACCTGGGGTGCATTTGACAACAATGATGACATGGACTCAGTGTGGGGTTTTAACTCTAAGACCAAGGACTCTGACTTCGAGCAGGGAGATTTCTTTAAATCTGATGATTTTGGTATAAACCCAGTTAGAATAGGATCTACACATACGGATGGCGCGTTCCAGACAAAAAGCCTATTTACTTTTGATGATTCGGTGCCTGCAACTCCAGTTTCCAAGTTCGAAAACTCTCCCAGGTACAGTGAGGCGGGGGATCATTTCTTTGACATGTCAAGGTTTGATTCCTTCAGGCACGAAAGTGGATATTCTCCACAACCAGAGAGGCTTACGAGATTTGATTCCATAAGTAGCAGTAAGGATTTTGGCTATGGTAATGAAAAGTTCACAAGGTTTGATTCCATAAGTAGCAGCAAAGATTTTGGCAACAGTAATGATAAGTTCACAAGGTTTGACTCCGTGAGTAGCAGCAAGGATTTTGGCTACAATCCTGAGAAGCTCACAAGGTTTGATTCCATGAGTAGCAGCAATGATTTCGGTTTCGGTCGTCAGGGCCATGCAAGGTTTGACTCAATTAGTAGCACCAAAGACTTCGGTCACAGTGGTCCATTCTCTTTCGATGACTCTGATCCATTCGGCTCCTCTGGGCCTTTTAAGGTCTCTTCAGAAAATCATTCTCCGAAAAAGGGTTCAGATAACTGGAGTGCATTCTAG 3351 0.4542 MAAPNMDQFETYFRRADLDGDGRISGAEAVSFFLGSNLPKQVLAQVWAYADQAKTGFLGRAEFFNALRLVTVAQSRRDLTPDIVKAALYGPAAAKIPAPQINLAAVSQPVPRPSAGSVGQMGVTGPNSAQGFAYRGQGLAGPGASPQYYPPQQNPAIRPHQSMPVTGAARPQQGVAGPDISRGVNMGGHNFSNPGLSNDWNNARPGMVATRPPGMNPSAAFQTSQSPISPMPQSSPISPMPQSSPISPMHQSSPLSSMPQSSPLSPMPQSSPVSSIPQSSPVSSMPQSTAVNAKSLGVSGNGFSSNSVLGNDFFSAASSISKQEPAGHSYSVTNVSSAIVPVSTGPQPVKKQNSLDSLQSAFSSVLPANSPFHRPQSVSNQQISPQASSSPHTPSGMTGGVGNANSDNVQLSWPKMKPTDVQKYTKVFLEVDTDRDGKITGEQARSLFLSWRLPIEVLKKVWDLSDQDNDSMLSLKEFCFALYLMERYREGRPLPQSLPSNVMFDETLMSMTGQPKIVPGNATWGTGQGFQQQQGMPGARPVAPTAGLRPPVHGSSAQADFTTQPNQQKSGTPVLEDSFLNRTDNGEQNILNTKPQDATTAEKKSEEAQNVILDSKEKMELYRNKMQELVLYKSRCDNRLNEITERASADKREAESLGKKYEEKYKQVAEIASKLTVEEAKFRDVQERKVELQQAIVKIEQGGSADGILQVRAERIQSDLEELFKALADRCKKHGMDVKSIAMVQLPSGWQPGIPEGAALWDEDWDKFEDEGFGNDLTFDTKNASSKPKPAFIDGEQNFSDDNSIHGSPVNANGKQENSANGDYTVEDESYAHSEEDLARSPHDSLAGRSTVESPSQDFSNPHFGKGSEADAETHRSFDESTWGAFDNNDDMDSVWGFNSKTKDSDFEQGDFFKSDDFGINPVRIGSTHTDGAFQTKSLFTFDDSVPATPVSKFENSPRYSEAGDHFFDMSRFDSFRHESGYSPQPERLTRFDSISSSKDFGYGNEKFTRFDSISSSKDFGNSNDKFTRFDSVSSSKDFGYNPEKLTRFDSMSSSNDFGFGRQGHARFDSISSTKDFGHSGPFSFDDSDPFGSSGPFKVSSENHSPKKGSDNWSAF* 1117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0125 1116 MobiDBLite consensus disorder prediction 772 884 - -
Pvu9g0125 1116 MobiDBLite consensus disorder prediction 141 288 - -
Pvu9g0125 1116 SMART efh_1 42 70 IPR002048 GO:0005509
Pvu9g0125 1116 SMART efh_1 8 36 IPR002048 GO:0005509
Pvu9g0125 1116 SMART efh_1 457 485 IPR002048 GO:0005509
Pvu9g0125 1116 SMART efh_1 423 451 IPR002048 GO:0005509
Pvu9g0125 1116 MobiDBLite consensus disorder prediction 517 535 - -
Pvu9g0125 1116 MobiDBLite consensus disorder prediction 244 288 - -
Pvu9g0125 1116 MobiDBLite consensus disorder prediction 369 410 - -
Pvu9g0125 1116 SMART eh_3 413 508 IPR000261 GO:0005515
Pvu9g0125 1116 SMART eh_3 1 93 IPR000261 GO:0005515
Pvu9g0125 1116 MobiDBLite consensus disorder prediction 556 598 - -
Pvu9g0125 1116 ProSiteProfiles EF-hand calcium-binding domain profile. 453 488 IPR002048 GO:0005509
Pvu9g0125 1116 SUPERFAMILY EF-hand 408 503 IPR011992 -
Pvu9g0125 1116 PANTHER EH DOMAIN 1045 1116 - -
Pvu9g0125 1116 PANTHER EH DOMAIN 1 1004 - -
Pvu9g0125 1116 PANTHER CALCIUM-BINDING EF HAND FAMILY PROTEIN 1045 1116 - -
Pvu9g0125 1116 PANTHER CALCIUM-BINDING EF HAND FAMILY PROTEIN 1 1004 - -
Pvu9g0125 1116 CDD EH 424 490 IPR000261 GO:0005515
Pvu9g0125 1116 CDD EH 9 75 IPR000261 GO:0005515
Pvu9g0125 1116 Coils Coil 605 625 - -
Pvu9g0125 1116 MobiDBLite consensus disorder prediction 216 231 - -
Pvu9g0125 1116 Gene3D - 3 95 - -
Pvu9g0125 1116 Gene3D - 414 503 - -
Pvu9g0125 1116 SUPERFAMILY EF-hand 5 84 IPR011992 -
Pvu9g0125 1116 MobiDBLite consensus disorder prediction 847 863 - -
Pvu9g0125 1116 MobiDBLite consensus disorder prediction 517 607 - -
Pvu9g0125 1116 MobiDBLite consensus disorder prediction 186 204 - -
Pvu9g0125 1116 ProSiteProfiles EH domain profile. 5 95 IPR000261 GO:0005515
Pvu9g0125 1116 MobiDBLite consensus disorder prediction 828 843 - -
Pvu9g0125 1116 Pfam EF hand 10 26 IPR002048 GO:0005509
Pvu9g0125 1116 Pfam Cytoskeletal-regulatory complex EF hand 414 499 IPR000261 GO:0005515
Pvu9g0125 1116 ProSiteProfiles EF-hand calcium-binding domain profile. 4 39 IPR002048 GO:0005509
Pvu9g0125 1116 MobiDBLite consensus disorder prediction 1094 1116 - -
Pvu9g0125 1116 ProSiteProfiles EH domain profile. 420 503 IPR000261 GO:0005515
Pvu9g0125 1116 MobiDBLite consensus disorder prediction 797 825 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0125 Pvu-Chr9 1944820 1955924 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0125 1 79 EF-hand Containing Proteins AT1G20760 32.911 4.79e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0125 K12472 - gmx:100784075 1781.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0125 9 1944820 1955924 Pvu9g0125 9 1944820 1955924 ECH