Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0120 ATGGGCGAGGTATCTGAAACGATGACGAAGAAGAAGAAGAAGGGACGCCCCTCTCTTTTGGATCTTCAAAAGCGATCTCTCAAGAAGGAACAGCAACAGGGCCAACACCACAACCAGCGACAGAACAACCCCAATTCCACCAATTCACACCCCAAAAACACCAACGTTGCTACCCACGACGACGACGACGACGAGCGCAAGGAGAAGAAGCACAAGCTCCTCGTCGGGCTCAATTCCCATCTCCACAACCCAACATTATTCCCCAATTCCCAGCCATTCAATTCCGATCCCAAGAGGCGCAAGATTGACCCTCTCCAACACCACCAAACGGATGGGAAGGTTCCGAAAGCGACTGACAGTAAACATGGTTCGCAGGGGGAGTCCGGTCCCACTACACCTTTGCCAGACAAAAAGCTCTTGCTGTTTATCCTTGACAGACTTCAAAAGAAGGACACGCACGGGGTGTTCTCTGAGCCTGTGGATCCAGAAGAGCTTCCTGATTATCATGACATCATCAAAAACCCGATGGATTTTGGAACTGTGAGAAAGAAATTGGATGGGGAACTATATACCGATTTGGAACATTTTGAGAAAGATGTGTTCTTGATTTGCTCTAATGCAATGCAATATAATTCATCAGATACCATTTACCACCGACAGGCCCGAGCCATGCAAGAGATCGCAAGGAAGGACTTTGAGAATCTGAGACAAGATAGTGATGATAGTGAACCACAGCCCAAAGTTGTGCAGAGAGGAAGGCCACCAGGCAAGCTCTCAAGAAAGTCACTGGGTATGCCTTCTGCTGAGCGCGTTGGTCCTGAATCTTCTTCTGATGCAACTCTTGCTTCTGGCGGGGATATTGCTAGTGGCTCCAACGGTTATAATCTTAGGAAAGTACCAAGCAAATTTCAGCCTACAGATTCATCTGCTAGGGCCTACAACAGCACTTTTAACAATGGAGGGTATACGGGTTGGTCCGAATGGGAGAATGAATTTCCAGCTTCTGTTGTAAAAGCTGTGTTAAGATATGGAAAGAAGCAGTATACAGTTGATGAGACCAGGCGCGATTCTTACAAAATACCAGTGACTTTAGGAAATGAAGGACCGCTGTTGACTACAGTTGAAGATGAAGTCAAGCAACTTCTTGCTGTTGGTATACACATGAAGCACAGTTATGCAAGAAGTCTAGCCCATTTTGCTGCAGATCTTGGTCCTGTTGTTTGGAAGATTGCTGCAAGTAAAATAAGCAGTGTTTTGCCTACAGGACATGAATTTGGTCCTGGATGGGTAAGTGAAGATGACGGGTCACAGAAGCAACACTTCCCAGTTTGTGACGAGGGTAGAACTTCAGACCCTCCCGTGGTAGAGGATTGTAGAAGTAGATTTTCTTCTCCATCTGGATCACTTCCCCTTGCAAATAGACCCTGCTTCCAAAGTGGAGACATGGTTATAAATAATTACCAGAAAGAGTTGAATCCGGCAACCAACATTGGTGGCGGATCTGAGTCCATAACTCCTGTGAGGATTCAGCAGGAATCCGTGGCGCACTCTGATGATTTTGGTTCACATGATTGGTTAGGTTCTAATTTTTCACCACAAATGAAGATGGTAAGACTTGCTGACCTAACTGGGTCTCCGAGTGCTGGGGTTGCTCCTCAAATGTTTGACATGGATCCCACAAGCAGCCGCATTGCGCAGACAAATATGAATCCTTCTCTTATGGGACAATACGGGAGCAAATCAAGTCAATTAGAATCCGGTAATTTATTGGCCCGGGAATCTGGGTTTGAGCCACGAAGTTGGTCTCAAGGGATTGCTGGGAAATCATCTTGGCCGGGTTTGGAAGTTCCCACTAAACAGAATTCTTTTGCACATTCTAATGACTTGAATGGAAGGATTGGAACTACAAATTCACCAAGTAGTTCCAACGTGGAGGCTGGTTCTCAGTTGCAGCCCAATTTGGCATTACAGCTCTGA 1977 0.4623 MGEVSETMTKKKKKGRPSLLDLQKRSLKKEQQQGQHHNQRQNNPNSTNSHPKNTNVATHDDDDDERKEKKHKLLVGLNSHLHNPTLFPNSQPFNSDPKRRKIDPLQHHQTDGKVPKATDSKHGSQGESGPTTPLPDKKLLLFILDRLQKKDTHGVFSEPVDPEELPDYHDIIKNPMDFGTVRKKLDGELYTDLEHFEKDVFLICSNAMQYNSSDTIYHRQARAMQEIARKDFENLRQDSDDSEPQPKVVQRGRPPGKLSRKSLGMPSAERVGPESSSDATLASGGDIASGSNGYNLRKVPSKFQPTDSSARAYNSTFNNGGYTGWSEWENEFPASVVKAVLRYGKKQYTVDETRRDSYKIPVTLGNEGPLLTTVEDEVKQLLAVGIHMKHSYARSLAHFAADLGPVVWKIAASKISSVLPTGHEFGPGWVSEDDGSQKQHFPVCDEGRTSDPPVVEDCRSRFSSPSGSLPLANRPCFQSGDMVINNYQKELNPATNIGGGSESITPVRIQQESVAHSDDFGSHDWLGSNFSPQMKMVRLADLTGSPSAGVAPQMFDMDPTSSRIAQTNMNPSLMGQYGSKSSQLESGNLLARESGFEPRSWSQGIAGKSSWPGLEVPTKQNSFAHSNDLNGRIGTTNSPSSSNVEAGSQLQPNLALQL* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0120 658 Gene3D - 134 251 IPR036427 GO:0005515
Pvu9g0120 658 SMART bromo_6 129 237 IPR001487 GO:0005515
Pvu9g0120 658 MobiDBLite consensus disorder prediction 1 35 - -
Pvu9g0120 658 MobiDBLite consensus disorder prediction 55 75 - -
Pvu9g0120 658 PANTHER BROMODOMAIN-CONTAINING PROTEIN-RELATED 7 458 - -
Pvu9g0120 658 MobiDBLite consensus disorder prediction 273 308 - -
Pvu9g0120 658 SUPERFAMILY Bromodomain 118 240 IPR036427 GO:0005515
Pvu9g0120 658 MobiDBLite consensus disorder prediction 235 308 - -
Pvu9g0120 658 MobiDBLite consensus disorder prediction 614 658 - -
Pvu9g0120 658 MobiDBLite consensus disorder prediction 96 120 - -
Pvu9g0120 658 ProSiteProfiles Bromodomain profile. 148 218 IPR001487 GO:0005515
Pvu9g0120 658 MobiDBLite consensus disorder prediction 599 658 - -
Pvu9g0120 658 MobiDBLite consensus disorder prediction 36 54 - -
Pvu9g0120 658 CDD Bromodomain 136 232 - -
Pvu9g0120 658 PANTHER BROMODOMAIN CONTAINING PROTEIN 7 458 - -
Pvu9g0120 658 ProSitePatterns Bromodomain signature. 153 210 IPR018359 -
Pvu9g0120 658 MobiDBLite consensus disorder prediction 1 135 - -
Pvu9g0120 658 Pfam Bromodomain 143 222 IPR001487 GO:0005515
Pvu9g0120 658 PRINTS Bromodomain signature 151 164 IPR001487 GO:0005515
Pvu9g0120 658 PRINTS Bromodomain signature 165 181 IPR001487 GO:0005515
Pvu9g0120 658 PRINTS Bromodomain signature 181 199 IPR001487 GO:0005515
Pvu9g0120 658 PRINTS Bromodomain signature 199 218 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0120 Pvu-Chr9 1909335 1913892 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0120 K22184 - gmx:100811115 1080.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0120 9 1909335 1913892 Pvu9g0120 9 1909335 1913892 ECH