Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0103 ATGGTTTCAGGAAAGGGAAAAAAAAAGCAGCATCGGCGTGTGACGGTGTTACCATTTCCCGGCTTTAACTCTGGTATCTGGGGACAGTGTGCCTGCAACTCCACATTGAGGTGTGGCAGGAGTGGTGTAGTAGAAAGATTCTGCGTCCAAGAAATCGCAATGCAAGCTGCTTCTTCAGGCATCGGTTACGGTCTCAAATATCAGGCTAGATGTATATCTGATGTAAAAGCAGACACAGATCACACTAGCTTCCTTGCAGGAACTCTGAGCCTCAAAGAAGAGAACGAGGTACATCTGATTCGGCTCTCGTCCAATGGAACCGAACTCTTCTGCGAGGGATTGTTTTCCCACCCCAACGAGATCTGGGACCTCGTCTCTTGTCCGTTTGATCAACGGATCTTTTCAACCGTCTATTCTAACGGTGAAACGTATGGAGCAGCTATATGGCAGATACCTGAGTTATATGGCGAGTTAAATTCACCTCAGCTTGAGCGAATTACTTCCCTTGACACTGATTCTGGGAAGATTAAATGTATTCTTTGGTGGCCATCTGGACGGCATGATAAATTGATCAGCATCAATGAGGAAAATATGTACTTGTGGAATTTAGATGTTTCAAAGAAAACTGCACAGGTACAATCACAAGATTCAGCTGGTATGCTGCACAAGTTATCTGGAGGGGCATGGGATCCTCATGATGTGAGTTCTGTTGTTGCAACTTGTGAATCGTATCTCCAATTTTGGGATGTCAGAACAATGAAGAAGAGTATTTCAGTTGAATGTTCTCATGTATGTAGTGTTGATTACCATCCTCAGAAGCAGCACATACTTGTTACTGCTGAACATGAGTCTGGGATACATATTTGGGATGTAAGAAAACCCAAAGTTCCCATCCAAGAGCTTCCAGGACATACTCATTGGGCGTGGACTGTCAAGTGTAATCCAGAGTATGATGGAATGATCTTGAGTGGCGGTACGGATTCGACTGTCAACTTGTGGCTTGCCTCAACGAATCATGACGAGTTAACAGTTGAAAGACAAGTAGATTCATCTGCCCGATGGGTTGATCCATTGCTTAATTCATACAGTGATTATGAAGACAGCATTTATGGGCTCACGTGGAGTTCTCGTGAACCATGGATATTTGCATCATTATCCTATGATGGCAGGGTTGTCGTAGAATCAGTGAAGTCTTTCATCCCCAAAAAATGA 1212 0.4389 MVSGKGKKKQHRRVTVLPFPGFNSGIWGQCACNSTLRCGRSGVVERFCVQEIAMQAASSGIGYGLKYQARCISDVKADTDHTSFLAGTLSLKEENEVHLIRLSSNGTELFCEGLFSHPNEIWDLVSCPFDQRIFSTVYSNGETYGAAIWQIPELYGELNSPQLERITSLDTDSGKIKCILWWPSGRHDKLISINEENMYLWNLDVSKKTAQVQSQDSAGMLHKLSGGAWDPHDVSSVVATCESYLQFWDVRTMKKSISVECSHVCSVDYHPQKQHILVTAEHESGIHIWDVRKPKVPIQELPGHTHWAWTVKCNPEYDGMILSGGTDSTVNLWLASTNHDELTVERQVDSSARWVDPLLNSYSDYEDSIYGLTWSSREPWIFASLSYDGRVVVESVKSFIPKK* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0103 403 PANTHER WD REPEAT-CONTAINING PROTEIN DWA2 54 403 - -
Pvu9g0103 403 SMART WD40_4 355 395 IPR001680 GO:0005515
Pvu9g0103 403 SMART WD40_4 108 150 IPR001680 GO:0005515
Pvu9g0103 403 SMART WD40_4 162 202 IPR001680 GO:0005515
Pvu9g0103 403 SMART WD40_4 294 334 IPR001680 GO:0005515
Pvu9g0103 403 SMART WD40_4 250 290 IPR001680 GO:0005515
Pvu9g0103 403 ProSiteProfiles Trp-Asp (WD) repeats profile. 301 333 IPR001680 GO:0005515
Pvu9g0103 403 PANTHER WD-REPEAT PROTEIN 54 403 IPR040323 -
Pvu9g0103 403 Gene3D - 53 402 IPR015943 GO:0005515
Pvu9g0103 403 SUPERFAMILY WD40 repeat-like 71 397 IPR036322 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0103 K23289 - gmx:100779030 713.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0103 9 1694251 1700368 Pvu9g0103 9 1694251 1700368 ECH