Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0087 ATGGCCACCACCGCCACCTCCGCCCCCACTTCTGCCACCGAACCTTCACCTTCCTCCGCCGATACGCCTCCGGCACCAATTCCTCCGAAGCAACCACCGCCTCCTCCGCTGCCTGCGTTGGCACCGGTGAAGCCAGAGGCGCCATTGTCCGACCCGAAATCTTCCTCGGACGCGAACGTAATCGTGGTCCCGAGCTACTCTCGATGGTTCTCGTGGGACTCGATTCACGAAAGCGAGGTGCGTCACCTCCCTGAGTTCTTCGAGTCGGCGTCCAAGAGCCCTAGGGTTTACAAGTACTACAGGAATTCCATCGTGAAGTTTTTCAGGTACAATCCCGCCCGAAAAATCACCTTCACTGATGTCCGCAAAACGCTTGTCGGAGACGTCGGTTCGATCCGCAGAGTCTTCGATTTCCTCGAAGCTTGGGGCCTTATCAATTACCACCCCTCTTCGTCGCTTACCAAACCCTTGAAGTGGGACGACAAAGAGACCAAATCCGATTCTGCGTCCAACCCCACCGAATCTTCTTCCGCTCCCGCTAAAGAAAACACGAAGAGACTCTGCAGTGGCTGCAAAGCCGTTTGTACTATTGCCTGTTTTGCTTGTGACAAGTATGATTTGACTCTTTGTGCGAGGTGTTATGTTCGTGGCAATTATAGAGTTGGTGTGAACTCTTCGGATTTTAGGCGAGTGGAGATAAGCGAGGAGACAAAGACAGATTGGAGCGAAAAGGAGACAACAAATCTTCTGGAAGCTATTACGCATTATGGTGATGATTGGAAGAGGGTTTCTCAGCATGTTGCTGGCAGAACTGAGAAGGAGTGTGTTGCTCATTTTTTGAAGCTTCCTTTTGCGGATCGATTCCAGAATTATCAACAACAACCTGCTGTCAATGGCACTGAAGACAGTTGTAATCAGTTAAAGAGGGTAACTAATGCTGAATCTGAATTGGATACTGTTGCCTCAGCTGAATCTAGTAAGAGAATGCGTCTCACGCCTCTTGCAGATGCAAGCAATCCTATTATGGCTCAGGCTGCTTTCCTGTCTGCTTTGGCAGGGTCAGAGGTTGCACAAGCTGCTGCTCAAGCTGCATTGACAACTCTTTCTGAGGTTTACAAAGCAACTAGAATAAATTATCGGTCATTTCCAAGGAATACAATGCTGCAAGATGCCAGTGTCGCATTTAATGGTGGCAATACTTCAGATTCATTTCAAGGATCTCGCCTGCATGCACATATACAGCTCGAGAAGGAAGAGTTAGATGTGGAAAAAGGAATTTCTGAGATTATAGAAGTTCAGATGAAAAATATCCATGGCAAGCTTGTCCATTTTGAAGATTTAGACCTGCAGATAGAAAAAGAAAGCCAGCAGCTGGAGCAAATGAAAAATATGTTTTTCCTTGATCAGCTTACTCTTTTATTTAATAAATCATCAGCTCCAAAAGCCGGAGAATGCCAAGAAGGCAATAGGGTAAGGACGAACCATGATTGA 1491 0.4735 MATTATSAPTSATEPSPSSADTPPAPIPPKQPPPPPLPALAPVKPEAPLSDPKSSSDANVIVVPSYSRWFSWDSIHESEVRHLPEFFESASKSPRVYKYYRNSIVKFFRYNPARKITFTDVRKTLVGDVGSIRRVFDFLEAWGLINYHPSSSLTKPLKWDDKETKSDSASNPTESSSAPAKENTKRLCSGCKAVCTIACFACDKYDLTLCARCYVRGNYRVGVNSSDFRRVEISEETKTDWSEKETTNLLEAITHYGDDWKRVSQHVAGRTEKECVAHFLKLPFADRFQNYQQQPAVNGTEDSCNQLKRVTNAESELDTVASAESSKRMRLTPLADASNPIMAQAAFLSALAGSEVAQAAAQAALTTLSEVYKATRINYRSFPRNTMLQDASVAFNGGNTSDSFQGSRLHAHIQLEKEELDVEKGISEIIEVQMKNIHGKLVHFEDLDLQIEKESQQLEQMKNMFFLDQLTLLFNKSSAPKAGECQEGNRVRTNHD* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0087 496 SUPERFAMILY Homeodomain-like 58 157 IPR009057 -
Pvu9g0087 496 MobiDBLite consensus disorder prediction 1 57 - -
Pvu9g0087 496 PANTHER SWI/SNF COMPLEX-RELATED 11 491 - -
Pvu9g0087 496 PANTHER SWI/SNF COMPLEX SUBUNIT SWI3B 11 491 - -
Pvu9g0087 496 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 238 289 IPR017930 -
Pvu9g0087 496 MobiDBLite consensus disorder prediction 19 45 - -
Pvu9g0087 496 ProSiteProfiles SWIRM domain profile. 61 156 IPR007526 GO:0005515
Pvu9g0087 496 ProSiteProfiles SANT domain profile. 236 287 IPR017884 -
Pvu9g0087 496 Gene3D - 236 287 - -
Pvu9g0087 496 MobiDBLite consensus disorder prediction 1 18 - -
Pvu9g0087 496 Pfam SWIRM domain 64 147 IPR007526 GO:0005515
Pvu9g0087 496 Gene3D - 67 151 IPR036388 -
Pvu9g0087 496 SMART sant 237 285 IPR001005 -
Pvu9g0087 496 Pfam Myb-like DNA-binding domain 239 282 IPR001005 -
Pvu9g0087 496 Coils Coil 444 464 - -
Pvu9g0087 496 ProSiteProfiles Myb-like domain profile. 233 283 IPR001005 -
Pvu9g0087 496 Pfam SWIRM-associated region 1 411 475 IPR032451 -
Pvu9g0087 496 CDD SANT 241 282 IPR001005 -
Pvu9g0087 496 SUPERFAMILY Homeodomain-like 237 286 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0087 Pvu-Chr9 1325144 1328968 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0087 165 279 EF-hand Containing Proteins AT3G07740 28.387 1.50e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0087 K11649 - gmx:100779777 813.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0087 9 1325144 1328968 Pvu9g0087 9 1325144 1328968 ECH