LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu9g0078	ATGAAAGGTGCTGTTCTCGTCGCTATTGCCGCTTCCATCGGTAATTTTCTCCAGGGATGGGATAATGCTACCATCGCCGGGGCTATTGTTTACATTAAGAAAGACCTTGCGCTGCAAACAACTATGGAAGGGCTTGTGGTGGCCATGTCCCTGATTGGGGCGACGCTAATCACCACATGCTCTGGTCCTGTATCGGATTGGCTTGGTCGGCGGCCCATGTTGATAATCTCATCTCTGCTCTATTTCTTGGGTGGTTTGGTGATGCTTTGGTCCCCTAATGTGTATGTGTTGTGCTTAGCGAGGTTACTTGATGGATTTGGGATTGGCCTGGCTGTGACTCTTATCCCGGTCTATATATCTGAAACAGCACCCTCTGAAATAAGGGGGTCTTTGAATACGCTTCCTCAGTTCAGTGGTTCTGGAGGCATGTTTTTGTCATACTGTATGGTTTTTGGCATGTCATTGACTCCCTCGCCTAGCTGGAGACTCATGCTTGGGGTTCTATCTATTCCTTCGCTCCTCTATTTTGCACTGACAGTTTTTTTCTTGCCTGAGTCTCCTCGGTGGCTGGTCAGCAAAGGAAGGATGCTGGAGGCTAAAAAGGTGCTCCAAAGATTGCGCGGAAGGGAGGATGTGTCAGGCGAGATGGCATTGCTGGTTGAAGGTCTCGAGATTGGAGGTGATACATCTATAGAAGAGTACATAATTGGCCCTGCTGAAGAGGTTGCTGATGGTCGGGAACTAGCAACAGAGAAAGATAAAATTCGATTATATGGATCCCAAGCAGGTCTCTCTTGGTTAGCAAAACCTGTCACTGGACAGAGTTCTATTGGCCTTGCATCACGCCATGGAAGCATCATCAACCAAAGCATGCCCCTCATGGATCCTATGGTGACACTGTTCGGTAGCATTCATGAGAAGCTCCCTGAGGCGGGAACTGGAAGCATGCGAAGCACTTTGTTTCCAACTTTTGGGAGCATGTTCAGCACTGCTGAGCCGCATGGTAAAAATGAACAGTGGGATGAAGAGAGCTTACAAAGGGAAGGTGAGGACTACATGTCAGATGCAGCCGGTGGGGACTCTGACGATAATTTGCAAAGTCCTTTAATCTCACGTCAAACAACAAGCCTTGAAAAAGACATGCCTCCTCCTCCTTCCCATGGCAGTATCCTGAGCAGCATGAGGCGTCACAGCAGTCTTATGCAAGGATCAGCTGAGCAAGTTGGTAGTACTGGCATTGGTGGTGGCTGGCAGCTAGCATGGAAATGGACTGATAAAGGTGAGGAGGGAAAAAGGCAAGGAGAGTTTAAAAGGATTTATTTACATGAGGAGGGAGTTTCTGCATCTCGTCGTGGATCCGTTGTTTCAATTCCTGGTGAAGGTGAATTTGTCCAGGCTGCTGCCTTGGTTAGCCAACCTGCTCTTTACTCCAAGGAGCTTATCGATGGACATCCAGTTGGTCCTGCAATGGTTCACCCATCTGAGACAGCTTCAAAGGGGCCAAGTTGGAAAGCTCTTCTTGAACCTGGGGTTAAGCATGCATTGATTGTTGGAGTTGGAATACAGATACTTCAGCAGTTTTCAGGGATAAATGGGGTTCTATATTACACACCTCAAATCCTCGAAGAGGCTGGTGTTGAAATTCTTCTTTCAGATATAGGCATTGGCTCAGAGTCTGCATCATTCCTTATCAGTGCTCTCACAACCTTATTGATGCTTCCTTGTATAGCCTTAGCCATGAAGCTCATGGATGTTTCAGGCAGAAGGCAATTGCTACTTACTACAATTCCCGTGCTGATAGTGTCACTGATTATTTTGGTCATTGGAAGCCTAGTAAATTTTGGCAATGTGGTCCATGCGGCAATCTCAACTACATGCGTTGTGGTTTATTTCTGCTGCTTTGTGATGGGTTACGGACCAATTCCAAACATTCTTTGCTCAGAGATTTTCCCCACTAGAGTGCGTGGCCTCTGCATTGCTATATGTGCGTTAGTATTCTGGATTGGAGACATCATTATCACATACTCGCTACCTGTGATGCTCAGCTCTTTAGGACTTGGTGGTGTCTTCGCCATTTATGCTGTGGTTTGTTTCATCTCCTGGATATTTGTGTTTTTGAAGGTTCCAGAAACAAAGGGCATGCCCCTTGAAGTCATCTCTGAATTCTTTTCTGTTGGTGCAAGGCAGGCTGCTACGGCTAAGAATGAGTAG	2211	0.4686	MKGAVLVAIAASIGNFLQGWDNATIAGAIVYIKKDLALQTTMEGLVVAMSLIGATLITTCSGPVSDWLGRRPMLIISSLLYFLGGLVMLWSPNVYVLCLARLLDGFGIGLAVTLIPVYISETAPSEIRGSLNTLPQFSGSGGMFLSYCMVFGMSLTPSPSWRLMLGVLSIPSLLYFALTVFFLPESPRWLVSKGRMLEAKKVLQRLRGREDVSGEMALLVEGLEIGGDTSIEEYIIGPAEEVADGRELATEKDKIRLYGSQAGLSWLAKPVTGQSSIGLASRHGSIINQSMPLMDPMVTLFGSIHEKLPEAGTGSMRSTLFPTFGSMFSTAEPHGKNEQWDEESLQREGEDYMSDAAGGDSDDNLQSPLISRQTTSLEKDMPPPPSHGSILSSMRRHSSLMQGSAEQVGSTGIGGGWQLAWKWTDKGEEGKRQGEFKRIYLHEEGVSASRRGSVVSIPGEGEFVQAAALVSQPALYSKELIDGHPVGPAMVHPSETASKGPSWKALLEPGVKHALIVGVGIQILQQFSGINGVLYYTPQILEEAGVEILLSDIGIGSESASFLISALTTLLMLPCIALAMKLMDVSGRRQLLLTTIPVLIVSLIILVIGSLVNFGNVVHAAISTTCVVVYFCCFVMGYGPIPNILCSEIFPTRVRGLCIAICALVFWIGDIIITYSLPVMLSSLGLGGVFAIYAVVCFISWIFVFLKVPETKGMPLEVISEFFSVGARQAATAKNE*	737

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu9g0078	736	CDD	MFS_GLUT_like	513	710	-	-
	Pvu9g0078	736	ProSitePatterns	Sugar transport proteins signature 1.	61	78	IPR005829	GO:0016021\|GO:0022857\|GO:0055085
	Pvu9g0078	736	PANTHER	-	1	733	-	-
	Pvu9g0078	736	PANTHER	MONOSACCHARIDE-SENSING PROTEIN 1	1	733	-	-
	Pvu9g0078	736	MobiDBLite	consensus disorder prediction	335	354	-	-
	Pvu9g0078	736	PRINTS	Sugar transporter signature	15	25	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Pvu9g0078	736	PRINTS	Sugar transporter signature	98	117	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Pvu9g0078	736	PRINTS	Sugar transporter signature	525	535	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Pvu9g0078	736	PRINTS	Sugar transporter signature	624	645	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Pvu9g0078	736	PRINTS	Sugar transporter signature	647	659	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Pvu9g0078	736	Gene3D	MFS general substrate transporter like domains	2	258	IPR036259	-
	Pvu9g0078	736	SUPERFAMILY	MFS general substrate transporter	5	717	IPR036259	-
	Pvu9g0078	736	ProSitePatterns	Sugar transport proteins signature 2.	103	128	IPR005829	GO:0016021\|GO:0022857\|GO:0055085
	Pvu9g0078	736	ProSiteProfiles	Major facilitator superfamily (MFS) profile.	7	712	IPR020846	GO:0022857
	Pvu9g0078	736	Pfam	Sugar (and other) transporter	7	224	IPR005828	GO:0016021\|GO:0022857\|GO:0055085
	Pvu9g0078	736	Pfam	Sugar (and other) transporter	500	723	IPR005828	GO:0016021\|GO:0022857\|GO:0055085
	Pvu9g0078	736	CDD	MFS_GLUT_like	10	191	-	-
	Pvu9g0078	736	MobiDBLite	consensus disorder prediction	327	367	-	-
	Pvu9g0078	736	Gene3D	MFS general substrate transporter like domains	495	734	IPR036259	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu9g0078	Pvu-Chr9	1199329	1204658	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu9g0078	1	736	Organic Solute Cotransporters	AT4G35300	71.007	0.0	981

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu9g0078	-		-	gmx:100791976	1355.12

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu9g0078	9	1199329	1204658	Pvu9g0078	9	1199329	1204658	ECH