Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0037 ATGAGTTCAGACAGCCGCAGCAGGAGCAGGAGCAGAAGCAGGAGCCCAATGGACCGTAAGATCCGATCTGATCGATTTTCCTACCGTGATGCACCTTACAGGAGGGATTCACGTCGGGGTTTCAGCCGAGACAATCTGTGCAAGAACTGCAAGAGGCCTGGTCATTATGCAAGGGAATGCCCTAATGTCGCAATTTGCCACAACTGTGGCCTCCCTGGGCACATTGCTTCTGAATGTACCACAAAGTCACTCTGCTGGAACTGTAAAGAACCTGGCCACATGGCCAGTAATTGTCCAAATGAGGGCATTTGCCATACCTGTGGCAAAGCTGGACACCGTGCTAGGGAATGCACCGCTCCTCCAATGCCTCCAGGAGACTTGAGGTTGTGCAACAACTGTTATAAGCAGGGCCACATTGCAGCTGAATGTACGAATGATAAGGCATGCAACAACTGTAGGAAGACAGGCCACTTGGCACGTGATTGTCCTAATGATCCTATTTGTAACTTGTGCAATGTTTCCGGGCATGTGGCTAGACAGTGTCCAAAAGCCAATGTTCTTGGAGATCGCAGTGGTGGTGGCGGCGGAGGAGGAGGTGGTGGTGGAGCTCGTGGTGGTGGTGGTGGTGGTTACCGAGATGTGATTTGCAGGAACTGCCAGCAATTAGGTCACATGAGTAGGGATTGCATGGGCCCCTTGATGATTTGTCACAATTGTGGAGGTCGCGGCCACCTGGCATACGAATGCCCTTCAGGTCGGTTTATGGATCGCTACCCCAGGAGGTATTGA 789 0.5209 MSSDSRSRSRSRSRSPMDRKIRSDRFSYRDAPYRRDSRRGFSRDNLCKNCKRPGHYARECPNVAICHNCGLPGHIASECTTKSLCWNCKEPGHMASNCPNEGICHTCGKAGHRARECTAPPMPPGDLRLCNNCYKQGHIAAECTNDKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKANVLGDRSGGGGGGGGGGGARGGGGGGYRDVICRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMDRYPRRY* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0037 262 Gene3D - 102 146 - -
Pvu9g0037 262 Gene3D - 147 196 - -
Pvu9g0037 262 Gene3D - 33 81 - -
Pvu9g0037 262 SUPERFAMILY Retrovirus zinc finger-like domains 205 253 IPR036875 GO:0003676|GO:0008270
Pvu9g0037 262 SMART c2hcfinal6 84 100 IPR001878 GO:0003676|GO:0008270
Pvu9g0037 262 SMART c2hcfinal6 103 119 IPR001878 GO:0003676|GO:0008270
Pvu9g0037 262 SMART c2hcfinal6 46 62 IPR001878 GO:0003676|GO:0008270
Pvu9g0037 262 SMART c2hcfinal6 129 145 IPR001878 GO:0003676|GO:0008270
Pvu9g0037 262 SMART c2hcfinal6 235 251 IPR001878 GO:0003676|GO:0008270
Pvu9g0037 262 SMART c2hcfinal6 215 231 IPR001878 GO:0003676|GO:0008270
Pvu9g0037 262 SMART c2hcfinal6 65 81 IPR001878 GO:0003676|GO:0008270
Pvu9g0037 262 SMART c2hcfinal6 167 183 IPR001878 GO:0003676|GO:0008270
Pvu9g0037 262 SMART c2hcfinal6 148 164 IPR001878 GO:0003676|GO:0008270
Pvu9g0037 262 ProSiteProfiles Zinc finger CCHC-type profile. 66 79 IPR001878 GO:0003676|GO:0008270
Pvu9g0037 262 PANTHER - 1 262 - -
Pvu9g0037 262 ProSiteProfiles Zinc finger CCHC-type profile. 85 100 IPR001878 GO:0003676|GO:0008270
Pvu9g0037 262 ProSiteProfiles Zinc finger CCHC-type profile. 168 183 IPR001878 GO:0003676|GO:0008270
Pvu9g0037 262 Pfam Zinc knuckle 167 183 IPR001878 GO:0003676|GO:0008270
Pvu9g0037 262 Pfam Zinc knuckle 235 251 IPR001878 GO:0003676|GO:0008270
Pvu9g0037 262 Pfam Zinc knuckle 85 100 IPR001878 GO:0003676|GO:0008270
Pvu9g0037 262 Pfam Zinc knuckle 215 229 IPR001878 GO:0003676|GO:0008270
Pvu9g0037 262 Pfam Zinc knuckle 148 164 IPR001878 GO:0003676|GO:0008270
Pvu9g0037 262 Pfam Zinc knuckle 103 118 IPR001878 GO:0003676|GO:0008270
Pvu9g0037 262 Pfam Zinc knuckle 66 80 IPR001878 GO:0003676|GO:0008270
Pvu9g0037 262 Pfam Zinc knuckle 46 62 IPR001878 GO:0003676|GO:0008270
Pvu9g0037 262 ProSiteProfiles Zinc finger CCHC-type profile. 216 229 IPR001878 GO:0003676|GO:0008270
Pvu9g0037 262 Gene3D - 82 101 - -
Pvu9g0037 262 SUPERFAMILY Retrovirus zinc finger-like domains 124 165 IPR036875 GO:0003676|GO:0008270
Pvu9g0037 262 PANTHER OS10G0545300 PROTEIN 1 262 - -
Pvu9g0037 262 ProSiteProfiles Zinc finger CCHC-type profile. 104 117 IPR001878 GO:0003676|GO:0008270
Pvu9g0037 262 ProSiteProfiles Zinc finger CCHC-type profile. 236 251 IPR001878 GO:0003676|GO:0008270
Pvu9g0037 262 Gene3D - 211 253 - -
Pvu9g0037 262 ProSiteProfiles Zinc finger CCHC-type profile. 130 145 IPR001878 GO:0003676|GO:0008270
Pvu9g0037 262 ProSiteProfiles Zinc finger CCHC-type profile. 47 62 IPR001878 GO:0003676|GO:0008270
Pvu9g0037 262 SUPERFAMILY Retrovirus zinc finger-like domains 37 82 IPR036875 GO:0003676|GO:0008270
Pvu9g0037 262 SUPERFAMILY Retrovirus zinc finger-like domains 83 121 IPR036875 GO:0003676|GO:0008270
Pvu9g0037 262 ProSiteProfiles Zinc finger CCHC-type profile. 149 164 IPR001878 GO:0003676|GO:0008270
Pvu9g0037 262 MobiDBLite consensus disorder prediction 1 29 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0037 K09250 - gmx:100775501 527.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0037 9 627527 632096 Pvu9g0037 9 627527 632096 ECH