Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0033 ATGGCATTTTCCATTCCCAACCTTTTTCCACCTCTTCTGCTCCTTCTTCTCTCTCTCTCCGTTAATTCTGGCACCGCTCACGATTACCAGGACGCATTGTCCAAGGCAATCCTCTTCTTCGAGGGGCAACGATCCGGATTCTTGCCGCAGGACCAGAGAATGCAGTGGCGCGCCAATTCGGGTCTCGGCGACGGCTGGACCTACAACCTCGACCTCACCGGCGGCTACTACGACGCCGGCGACAACGTCAAGTTCGGGTTTCCGATGGCCTTCACCACCACAATGCTCTCCTGGAGTGTTATCGAATTTGGAGACATGATGCCTCCCAACGAGCACAGAAACGCGCTGGTGGCAATCCGTTGGGCTACCGATTATTTGCTCAAAACCGTTTCTCAGCCCAACCGCATTTTCGTTCAGGTGGGTGATCCAATCTCTGACCACAGCTGTTGGGAAAGACCCGAGGACATGGACACAAGCAGGACTGTGTATGCTGTTGATGCACCGAACCCAGCTTCAGATGTGGCTGGTGAAACTGCTGCGGCACTGGCTGCTTCATCCATGGCTTTTCGTTCATCGGATCCTGCTTATTCAGAGACTTTGCTACGAAATGCTGTCAAGGCTTTTCAACTTGCAGATAACTATAGGGGTGCCTACAGTGACAATGCTAATGTTAGGGATGGTGTCTGCCCATATTATTGTGACTTCGATGGATATCAGGACGAATTGCTATGGGGAGCCGCATGGCTAAGGAGGGCCACTGAAGACGACAATTTCCTGAACTACATTCAAAGCAATGGCAAAACGCTAGGTGCTGAAGAAAATATAAATGAGTTCGGTTGGGACAACAAGCATGCTGGCCTTAATGTTCTTGTCTCCAAGGAAGTTCTAGAAGGCAAGGTGTTATCTCTTGATTCCTACAAGACTTCGGCAGAGAGCTTTCTGTGCACACTGATACCCGAAACTTCAAGCTCACATATAGAGTACACTCCCGGTGGACTCATATACAGGCCAGGGGGTAGCAACTTGCAGCATGCAACTTCAATTGCTTTCCTTGAATTGGTTTACGCTAATTACCTATCACGCACTTCACAAACCATCAATTGTGGGAACATCTATGTTAATGCACAAACACTTCGCCAGCGTGCTAAGAAGCAAGTTGATTACATTTTGGGTGATAACCCAATGGGTATGTCGTACATGGTTGGCTATGGCAACAAATATCCACAGCGTATTCACCATCGTGGCTCCTCTTTACCCTCCATCAAGGACCATCCTCAAGTCATTGCCTGCAAAGAAGGCTCAATCTACTTCAACTCGTCCAATCCTAATCCTAATGTTCTCGTGGGAGCCATTGTGGGAGGACCCGGAGAAGATGATTTGTATGGGGATGATAGGGCTGATTTTAGGAAGTCCGAACCAACCACATACATTAATGCACCATTTGTTGGGATTTTAGCATACTTTGTTGCTAATCCCAATCCTTGA 1485 0.4842 MAFSIPNLFPPLLLLLLSLSVNSGTAHDYQDALSKAILFFEGQRSGFLPQDQRMQWRANSGLGDGWTYNLDLTGGYYDAGDNVKFGFPMAFTTTMLSWSVIEFGDMMPPNEHRNALVAIRWATDYLLKTVSQPNRIFVQVGDPISDHSCWERPEDMDTSRTVYAVDAPNPASDVAGETAAALAASSMAFRSSDPAYSETLLRNAVKAFQLADNYRGAYSDNANVRDGVCPYYCDFDGYQDELLWGAAWLRRATEDDNFLNYIQSNGKTLGAEENINEFGWDNKHAGLNVLVSKEVLEGKVLSLDSYKTSAESFLCTLIPETSSSHIEYTPGGLIYRPGGSNLQHATSIAFLELVYANYLSRTSQTINCGNIYVNAQTLRQRAKKQVDYILGDNPMGMSYMVGYGNKYPQRIHHRGSSLPSIKDHPQVIACKEGSIYFNSSNPNPNVLVGAIVGGPGEDDLYGDDRADFRKSEPTTYINAPFVGILAYFVANPNP* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0033 494 PANTHER ENDOGLUCANASE 24 13 493 - -
Pvu9g0033 494 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 388 414 IPR018221 -
Pvu9g0033 494 PANTHER ENDO-1,4-BETA-GLUCANASE 13 493 - -
Pvu9g0033 494 Pfam Glycosyl hydrolase family 9 29 485 IPR001701 GO:0004553|GO:0005975
Pvu9g0033 494 Gene3D - 25 492 IPR012341 GO:0005975
Pvu9g0033 494 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 461 479 IPR033126 -
Pvu9g0033 494 SUPERFAMILY Six-hairpin glycosidases 12 490 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0033 Pvu-Chr9 584396 588292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0033 8 491 Glycoside Hydrolase AT1G70710 60.412 0.0 609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0033 K01179 - gmx:100799911 929.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0033 9 584396 588292 Pvu9g0033 9 584396 588292 ECH