LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu9g0027	ATGTTTATTGACGGATATCACGGGACATCATCATTTGAGCAGACATATACATGTTACTCTGCTTCATTTGTTGAAAAGCCCGAAATTGAAAATGGTGATAAAATTATAATGCCTCCTTCAGCCCTTGATCATCTAGCATTTTTACGTATTGATTATCCTATGATGTTTAAACTCACAAATGGTGCTTCTGAGCGGGTTTCTCATTGTGGGGTTCTGGAGTTCATCGCAGATGAAGGAACTATATATATGCCATACTGGATGATGCAGAATATGCTTTTGCAAGAGGGAGACACTGTACGAGTGAAATATGCATCACTTCCAAAGGGAACATACGTTAAATTACAACCCCACACAAAGGACTTTTTTGATATCTCCAATCCAAAAGCTATCTTAGAGACCAGTTTGAGAAAATTTTCATGCTTGACTACTGGAGATACTATCATGGTGACATACAACAACAAAAGGTATTACTTGGATATTATAGAAACAAAGCCTGCTAATGCTATAAGCATCATCGAGACAGACTGTGAGGTGGACTTTGCTCCTTCCTTGGATTACAAGAATCTTGGAAAGCCTACTATTGCAGACAAAACACAAAAGGAAGGTAAGTTCAATCCATTTGTTGGGACTGGCAGACGCTTGGATGAAAAACCAATTCCTCCTGTTTATTCATCAGGGCATAAATACAAAGGAGCTGATGTTCCAAATGTGAATGCTGTGTCTTCTGCAACATCTAGTTCACCAAATTTTGCTCGTCCATCTGAGAGAAAAGTAGTATTTGGATCAAACTTTTACCGTACAAAAGAAACAGGAAAGGAAGAGATGGAGCCAAAACCAGAGCCACCCCGTCAGAAGCAACTAAGATTTCAGCCTTTCGTAGGGAAGAAGTATTCCCTAATGGGTTGA	906	0.3929	MFIDGYHGTSSFEQTYTCYSASFVEKPEIENGDKIIMPPSALDHLAFLRIDYPMMFKLTNGASERVSHCGVLEFIADEGTIYMPYWMMQNMLLQEGDTVRVKYASLPKGTYVKLQPHTKDFFDISNPKAILETSLRKFSCLTTGDTIMVTYNNKRYYLDIIETKPANAISIIETDCEVDFAPSLDYKNLGKPTIADKTQKEGKFNPFVGTGRRLDEKPIPPVYSSGHKYKGADVPNVNAVSSATSSSPNFARPSERKVVFGSNFYRTKETGKEEMEPKPEPPRQKQLRFQPFVGKKYSLMG*	302

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu9g0027	301	MobiDBLite	consensus disorder prediction	267	283	-	-
	Pvu9g0027	301	Gene3D	-	5	106	IPR042299	-
	Pvu9g0027	301	Pfam	Ubiquitin fusion degradation protein UFD1	12	182	IPR004854	GO:0006511
	Pvu9g0027	301	MobiDBLite	consensus disorder prediction	261	301	-	-
	Pvu9g0027	301	PANTHER	UBIQUITIN FUSION DEGRADATON PROTEIN 1	1	301	IPR004854	GO:0006511
	Pvu9g0027	301	PANTHER	UBIQUITIN FUSION DEGRADATION PROTEIN 1 HOMOLOG	1	301	-	-
	Pvu9g0027	301	Gene3D	-	108	181	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu9g0027	Pvu-Chr9	544533	547375	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu9g0027	K14016		-	gmx:100795133	459.144

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu9g0027	9	544533	547375	Pvu9g0027	9	544533	547375	ECH