Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2977 ATGGAAGCTGAAAGGGTTGAATTGCTTAGTGCAGTTGAGGATCAATATGGAGGAGTTGTTGTAAACGTGGAGAATCATGAACCAATGGATCCTAAATTCTTCTCTTCCATATTGGAAGCTTCAATGTACAATTGGAGGCAACAGGGAAAAAAAGGGGTCTGGCTCAAGTTGCCCATACTGCATTCAAATCTTGTTGATTCTGCAGTCAAGGCTGGATTTAGGTATCACCATGCTGAGGCAGATTACTTGATGCTTGTGCGTTGGATTCCAGATACTCCTGATACATTTCCTGCAAATGCTTCACATCGCGTGGGTATTGGTGCTTTTGTCTTTAACAGCGAGAAGGAGATGCTTGTGGTTCAGGAAAGAAATGGCGTATTCGGAGGCACAGGTGTATGGAAGATGCCTACAGGAGTTGTTAATGAAGGTGAGGATTTTTGTGAAGCTGCAGTTAGAGAAGTCAGAGAAGAGACAGGGATAGAGACGAAGTTTGTTGAAGTTTTAGCTTTCAGGCAAAGCCACAAGTCATTCTTCGAGAAATCAGATTTGTTCTTTGTGTGCATGTTGCAACCTCTATCCTTTGACATTCAGATTCAGGCTTCGGAAATTGAGGCAGCGAAGTGGATGCCAATTGAAGATTATGCTGCCCAGCCTTTTGTGCAAGGAAATGAGAACTTTGACTTTGTTGAAAAAATATGCTCTTCAAAGTTGGATGGCAACTACACTGGTTTTTCTAACGTGTGTAGTTGTACTTCATCTGGCAAAAAATCCTATCTGTATTTTAGCAACCGGGATGCCAGCCTTTTGTTAGCTTCCAAAAAGGAGCAGGCTTGA 834 0.4245 MEAERVELLSAVEDQYGGVVVNVENHEPMDPKFFSSILEASMYNWRQQGKKGVWLKLPILHSNLVDSAVKAGFRYHHAEADYLMLVRWIPDTPDTFPANASHRVGIGAFVFNSEKEMLVVQERNGVFGGTGVWKMPTGVVNEGEDFCEAAVREVREETGIETKFVEVLAFRQSHKSFFEKSDLFFVCMLQPLSFDIQIQASEIEAAKWMPIEDYAAQPFVQGNENFDFVEKICSSKLDGNYTGFSNVCSCTSSGKKSYLYFSNRDASLLLASKKEQA* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2977 277 Pfam NUDIX domain 102 225 IPR000086 -
Pvu8g2977 277 ProSiteProfiles Nudix hydrolase domain profile. 101 233 IPR000086 -
Pvu8g2977 277 Gene3D - 6 94 - -
Pvu8g2977 277 PANTHER NUDIX HYDROLASE RELATED 6 271 IPR003293 -
Pvu8g2977 277 SUPERFAMILY Nudix 70 223 IPR015797 -
Pvu8g2977 277 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 61 79 IPR003293 -
Pvu8g2977 277 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 83 99 IPR003293 -
Pvu8g2977 277 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 99 117 IPR003293 -
Pvu8g2977 277 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 187 211 IPR003293 -
Pvu8g2977 277 ProSitePatterns Nudix box signature. 138 159 IPR020084 GO:0016787
Pvu8g2977 277 Pfam Nudix hydrolase domain 9 89 IPR040618 -
Pvu8g2977 277 PANTHER NUDIX FAMILY HYDROLASE 6 271 - -
Pvu8g2977 277 CDD Nudix_Hydrolase_12 102 221 - -
Pvu8g2977 277 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 103 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2977 Pvu-Chr8 59254567 59257661 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2977 - - gmx:100818821 465.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2977 8 59254567 59257661 Pvu8g2977 8 59254567 59257661 ECH