Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2970 ATGAGATTATCATCGTTGCGGCTTGCTTTGGTGTTGGTGTTAATTGGGGCATTGGGGAAGTTACAGAGGTCAGAGGGTATTCGATTTGTGATAGACAGAGATGAGTGTTTCTCCCATGATGTCAAGTACGAGGGTGACACTGTTCATGTCTCTTTCGTTGTAATTAAGGCTGATTCTCCCTGGCATTACGGCGACGAAGGTGTCGATCTCGTGGTAAAGGGACCTTCTGGTGAGCAAATTCATGATTTCCGGGACAAGACCAGTGACAAATTTGACTTTGTGGCTCACAAATCAGGGGTCCATAAGTTCTGCTTCACCAACAAGTCTCCTTATCACGAAACTGTCGATTTTGATGTACATGTCGGTCACTTCTCTTACTTTGAGCAACATGCAAAAGATGAGCATTTTACCCCTTTGCTGGAGCAGATAGGGAAGTTGGAGGAAGCTCTATACAACATTCAGTTTGAACAGCACTGGTTAGAGGCTCAGACTGATCGCCAAGCAATAGTGAACGATGCAATGAGCAGAAGAGCAATACACAAGGCAATTTTTGAATCAGCTGCACTGATTGGGGCTAGTGCGCTCCAAGTGTACCTTCTACAGCGATTGTTTGAAAGAAAATTGGGTACCTCAAGAGTTTAG 642 0.447 MRLSSLRLALVLVLIGALGKLQRSEGIRFVIDRDECFSHDVKYEGDTVHVSFVVIKADSPWHYGDEGVDLVVKGPSGEQIHDFRDKTSDKFDFVAHKSGVHKFCFTNKSPYHETVDFDVHVGHFSYFEQHAKDEHFTPLLEQIGKLEEALYNIQFEQHWLEAQTDRQAIVNDAMSRRAIHKAIFESAALIGASALQVYLLQRLFERKLGTSRV* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2970 213 SMART EMP24_GP25L_2 26 205 IPR009038 -
Pvu8g2970 213 ProSiteProfiles GOLD domain profile. 34 121 IPR009038 -
Pvu8g2970 213 Pfam emp24/gp25L/p24 family/GOLD 34 205 IPR009038 -
Pvu8g2970 213 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 24 209 IPR015720 -
Pvu8g2970 213 PANTHER TMP21-RELATED PROTEIN-RELATED 24 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2970 Pvu-Chr8 59222845 59225428 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2970 - - gsj:114403744 403.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2970 8 59222845 59225428 Pvu8g2970 8 59222845 59225428 ECH