Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2872 ATGGAGGGAAAGAGGAGGAGGTTAGAATCGGAGTCACAAGCACAGAGCGTGATTCTTCTGATGAAAATCAAAGAATTCACTCGAGCTTTGCTCACAGACCTCACCAACGGACGCTCACCACTCATTCTCATCGATCGCTTCAGAAGCTACTGCGCCGTTCCTGACGCCAACTGCTTTTGTGCCTCCGATTTGCCGTGCGGAAAGGAAGCTCTCACACTCCGCAAGAAATCCCACGCGCACAGACTAGTTGTCATGTTGAGAGTGATGCTGATTGTTCAGAAACTTTTGCAAGAGAACAAGCACAGTTCCAAGAGAGACATTTATTACACGTATCCTTCTTTATTTTTGGATCAGTCTGTGGTGGACCAAGCAATTAATGATACATGTATTCTTATGCAGTGCAGTCGCCATAACCTTAATGTGGTTTCAGCAGGGAACGGGTTAATTATGGGCTGGATAAGATTCTCCGAAGGAGAAAGGATATTTGACTGCATAAGTTCTCCTAACAGTAAGTTCAAGGTATCCTTGTTTCTAGAATTGGGGAGATTTCCTAACCTGGTCATAGATATCATTAGTGTTGCGCAATACATATTAGTTGTGGAGAAAGAATCAGTTTTCCAAAGACTGGGAAACGACCAATTCTGCAATGCAAATCACTGTATTGTCATCACTGGAAGAGGCTACCCAGATATTCCTACAAGAAGGTTTTTGCGGCTTCTGGTAGAGAATTTGCGCCTGCCTGTTTATTGCTTGGTAGATTGTGATCCCTATGGCTTTGACATTCTCACCACTTACAGATTTGGCTCCATGCAAATGGCTTATGACACGAAACATCTTCGTGTCCCAGAGATACGCTGGCTTGGAGTTTTTCCTTCAGATTCAGAGAGATATTTTGTTCCAAAGCAGTGTCTCCTTCCTTTGACTGCTGAAGACAAAAGAAAAGGTGAAGCCATGTTACTTAGATGCTACCTTGAAAAGGAGGTACCACAATGGAGGTTGGAGCTAAAGCTGATGCTGCAAAAAGGAGTGAAGTTTGAGATTGAAGCCTTATCTGCGCACGCACTTTCATTCTTGTCAGATTCTTACATCCCATCTAAAATTGAACGTAAGTTGATAATGTAG 1122 0.4323 MEGKRRRLESESQAQSVILLMKIKEFTRALLTDLTNGRSPLILIDRFRSYCAVPDANCFCASDLPCGKEALTLRKKSHAHRLVVMLRVMLIVQKLLQENKHSSKRDIYYTYPSLFLDQSVVDQAINDTCILMQCSRHNLNVVSAGNGLIMGWIRFSEGERIFDCISSPNSKFKVSLFLELGRFPNLVIDIISVAQYILVVEKESVFQRLGNDQFCNANHCIVITGRGYPDIPTRRFLRLLVENLRLPVYCLVDCDPYGFDILTTYRFGSMQMAYDTKHLRVPEIRWLGVFPSDSERYFVPKQCLLPLTAEDKRKGEAMLLRCYLEKEVPQWRLELKLMLQKGVKFEIEALSAHALSFLSDSYIPSKIERKLIM* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2872 373 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11-1 11 369 - -
Pvu8g2872 373 Gene3D - 5 144 IPR036388 -
Pvu8g2872 373 PRINTS DNA topoisomerase VI subunit A family signature 104 115 IPR002815 GO:0003677|GO:0003918|GO:0005694
Pvu8g2872 373 PRINTS DNA topoisomerase VI subunit A family signature 118 135 IPR002815 GO:0003677|GO:0003918|GO:0005694
Pvu8g2872 373 PRINTS DNA topoisomerase VI subunit A family signature 136 151 IPR002815 GO:0003677|GO:0003918|GO:0005694
Pvu8g2872 373 PRINTS DNA topoisomerase VI subunit A family signature 197 214 IPR002815 GO:0003677|GO:0003918|GO:0005694
Pvu8g2872 373 PRINTS DNA topoisomerase VI subunit A family signature 221 242 IPR002815 GO:0003677|GO:0003918|GO:0005694
Pvu8g2872 373 PRINTS DNA topoisomerase VI subunit A family signature 253 269 IPR002815 GO:0003677|GO:0003918|GO:0005694
Pvu8g2872 373 Gene3D - 146 373 - -
Pvu8g2872 373 PRINTS SPO11 homologue signature 110 130 IPR013048 GO:0003677|GO:0003918|GO:0042138
Pvu8g2872 373 PRINTS SPO11 homologue signature 211 226 IPR013048 GO:0003677|GO:0003918|GO:0042138
Pvu8g2872 373 PRINTS SPO11 homologue signature 258 277 IPR013048 GO:0003677|GO:0003918|GO:0042138
Pvu8g2872 373 PRINTS SPO11 homologue signature 293 317 IPR013048 GO:0003677|GO:0003918|GO:0042138
Pvu8g2872 373 PRINTS SPO11 homologue signature 354 373 IPR013048 GO:0003677|GO:0003918|GO:0042138
Pvu8g2872 373 Pfam Type IIB DNA topoisomerase 81 141 IPR013049 GO:0003677|GO:0003824|GO:0005524|GO:0005694|GO:0006259
Pvu8g2872 373 SUPERFAMILY DNA topoisomerase IV, alpha subunit 79 369 IPR036078 GO:0003677|GO:0005694
Pvu8g2872 373 CDD TOPRIM_TopoIIB_SPO 196 357 IPR034136 -
Pvu8g2872 373 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11 11 369 IPR002815 GO:0003677|GO:0003918|GO:0005694
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2872 Pvu-Chr8 58577466 58580947 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2872 K10878 - gmx:100813920 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2872 8 58577466 58580947 Pvu8g2872 8 58577466 58580947 ECH