Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2870 ATGTCGTTGGGAATCCTTCGATCTCGCGCGATTTCATTTGCATCGAAGCGATTCCTCTGCACCAATGCAGCTTCCGCTCCTCTTCCTCCTTCTCCTTCCGCCGCCACTCCCAGGCGCTGGAACTTCCTCAAATACGCCGTCGTCGGCACACTTACCGGAGCCATCGGATTTTCCGGTTACGCCTCTTACGCTTACAATTTGGAGGAAATAGAAGAGAAAACGAGGTCCCTCCGTGAATCTACCAAATACACTGCTGCTGATGGAGCCACTGCGCTCGATAAATTTCAAGGTTTGCTCTATTCAACTGCAATGACCGTGCCTGCTAAAGCAGTAGAGCTTTATTTGGATTCAAGAAGGCTAATTGAAGAACAAGTTAGGAGTTATACAGAACCATACACAGACAAGCTCCTTCCTGATTTGCTTCCTCAGGAGCAACATGTGTTTACACTTGTTCTTGATCTGAATGAAACATTGATTCACTACATTTGGACGCGAGATACAGGTTGGCAGACTTTCAAAAGACCTGGAGTTGATGCCTTCTTGGAACATTTAGCCCAGTTCTACGAAATAGTGGTGTACACAGACGAACAGAATATGTTTGTTGACCCTGTTATTGAAAGGCTGGATACCAAGCACTGCATTAGATACAGGCTATCAAGGCCAGCTACTAAGTATCAGGATGGGAAACACTTCAGAGACCTTTCTAAATTAAACAGAAATCCAGCAAAAGTCCTTTATTTAAGTGGTCATGCTCTGGAAAGTTGCCTACAGCATGAGAACTGTGTTCCCATTAAGGCATGGCAGCAGCAAGATATAGATGACACGGCCCTTTTGGATTTTATACCATTTCTTGAGTTTGTTGCCCGTAGTAGTCCATCTGATATAAGACCAGTGCTAGCCTCTTACGAAGGATGTGATATTCCCAGTGAATTTATCAGGCGTTCCAAAGAGCATCAGAGGAGAATGCAAGACCAGAAGCATCGTAGTCGCTTCTGGAAATAA 1002 0.4491 MSLGILRSRAISFASKRFLCTNAASAPLPPSPSAATPRRWNFLKYAVVGTLTGAIGFSGYASYAYNLEEIEEKTRSLRESTKYTAADGATALDKFQGLLYSTAMTVPAKAVELYLDSRRLIEEQVRSYTEPYTDKLLPDLLPQEQHVFTLVLDLNETLIHYIWTRDTGWQTFKRPGVDAFLEHLAQFYEIVVYTDEQNMFVDPVIERLDTKHCIRYRLSRPATKYQDGKHFRDLSKLNRNPAKVLYLSGHALESCLQHENCVPIKAWQQQDIDDTALLDFIPFLEFVARSSPSDIRPVLASYEGCDIPSEFIRRSKEHQRRMQDQKHRSRFWK* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2870 333 PANTHER NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED 21 325 - -
Pvu8g2870 333 ProSiteProfiles FCP1 homology domain profile. 143 287 IPR004274 -
Pvu8g2870 333 SMART forpap2 146 275 IPR004274 -
Pvu8g2870 333 Pfam NLI interacting factor-like phosphatase 149 296 IPR004274 -
Pvu8g2870 333 Gene3D - 133 317 IPR023214 -
Pvu8g2870 333 SUPERFAMILY HAD-like 135 300 IPR036412 -
Pvu8g2870 333 PANTHER OS05G0513200 PROTEIN 21 325 - -
Pvu8g2870 333 CDD HAD_FCP1-like 148 264 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2870 K17496 - gmx:100803155 628.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2870 8 58565529 58570029 Pvu8g2870 8 58565529 58570029 ECH