Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2848 ATGGCACTCGAATCTTGGGTTCTGAGTTACCGAAGCTTCAACCCCAGATCCAGATTATTTTACCCTGAGCATGGAAATCGGCGAAAGAGCATACCGATCAAAGTTTTGGGTAGAAATGCTAGATATCCATTTCCCTCTGTTTCCAGTTGTGTTGGTCCATCCACTTTTTCAACCCTTCAGGCTTCAAGTTTTGGAGCAGATGCCAAGTTACTAGATAGAACTCGGTTGAGGTGTTTTGATGGTGGCAGTGATGGTTTGAGTGAGAGGAATGCTGTTTCCGATACCAATTTGAACTTTATGCATGAATTGTTGAAGAGGGGAATCATCCTAGCTGCAACTGTTTGTGGGGTTTTGGTGTTTGGATGTCCACGAGTGTTTGCTGTTGAAGGTGTTGTGGATGCAGGATATGGCGTTATTGGACAGAGCATACTTCTGCTTAGGAATACTTGGCCTAAAGTGTTGCAAGTTCTTCGTATATTTAAGGAGCAAGGTTTGGTGCTGGCAGTGCTTTTGAGCCTTTCAGCCTTTTTCTCTATGGCAGAGACTTCAATCACCACACTTTGGCCTTGGAAGGTTCGTGAGTTGGCTGAAAAGGAGTCTGAAAATGGCGTTTTCAGACTACTCCGAAGTGATGTTACTCGATTCCTTACAACAATACTTATTGGCACAACGGTGGTCAATATTGGGGCAACTGCACTGGTCACTGAAGCAGCAACTGCTATGTTTGGTGAAGCAGGTGTTAGTGCCGCAACAGGAGTGATGACTGTTGCCATTTTGCTTCTCACTGAAATCACTCCAAAAAGCATAGCTGTTCATAATGCCACAGAGGTGGCCCGTTTTGTGGTCAGGCCAGTTGCATGGCTTTCCCTGGTGCTGTATCCTGTGGGAAGAATTGTTACATATCTTTCAATGGGGATGCTGAAATTGCTTGGCCTAAAAGGAAGAAGTGAGCCATATGTAACAGAAGATGAGCTAAAATTGATGCTAAGAGGTGCTGAATTAAGTGGGGCAATAGAGGAGGAAGAGCAGGATATGATTGAAAATGTTCTAGAGATAAAAGACACACATGTCAGAGAGGTTATGACACCTCTTGTTGATGTTGTTGCGATTGATGGAAGTTCAAGCCTGGTAGACTTTCATCACTTGTGGGTCACACATCAGTACTCAAGGGTACCTGTTTTTGAGCAGCGCGTTGATAATATAATGGGTATAGCATATGCAATGGATCTGCTGGATTATGTTCAAAAGGGGGAGTTGCTTGAAAGTACTACTGTTGTAGATATGGCTCACAAACCTGCTTATTTTGTACCTGATTCAATGTCTGTTTGGAATCTTCTTAGAGAGTTCAGAATCAGGAAGGTTCACATGGCGGTTGTTCTTAATGAGTATGGTGGAACTGTGGGGATTGTAACTCTTGAAGATGTTGTGGAGGAAATTGTTGGCGAAATCTTTGATGAAAATGACTCAAAGGAGGAGATACAGAAAAAAACTGGTTACGTAGTAATGCGAGCTGAGGGCATTTTTGATGTGGATGCAAACACATCTATTGATCAGCTCTCAGAAGATTTGAACATCAAGATGCCGGAGGGTCATCAATATGAGACAGTATCAGGCTTTGTGTGTGCGGCATTTGGATACATTCCAAGGACAGGTGAGTTCATAAAAGTAGTTCTTGAAAGGGAAGATGAAGATGATAACAATGAGGCCAGTGCTGAACAGCAGGATCAGAAGGAAAAGAACCAGATTTTCAAACTTGAGATACTAGCTGGAAATGCCAGAAAGGTGAGCGCAGTTCGGTTTGAACGAATAAATAATGATGAGATGTTGGAGACTAAAGTCACTCGCATGGTCCCCAAAATCATGAAAAGAAAATGGATCAGTGCTGAAAACTTGGAGGAGGATGCAGAATATGATGGAGATGCATTTGCAAAGAAACCACAGGATGACAGTTCTGGAGAAAAATTAGTTGAGCAGGAAAATTCTAGTTCAGAATAA 1995 0.4266 MALESWVLSYRSFNPRSRLFYPEHGNRRKSIPIKVLGRNARYPFPSVSSCVGPSTFSTLQASSFGADAKLLDRTRLRCFDGGSDGLSERNAVSDTNLNFMHELLKRGIILAATVCGVLVFGCPRVFAVEGVVDAGYGVIGQSILLLRNTWPKVLQVLRIFKEQGLVLAVLLSLSAFFSMAETSITTLWPWKVRELAEKESENGVFRLLRSDVTRFLTTILIGTTVVNIGATALVTEAATAMFGEAGVSAATGVMTVAILLLTEITPKSIAVHNATEVARFVVRPVAWLSLVLYPVGRIVTYLSMGMLKLLGLKGRSEPYVTEDELKLMLRGAELSGAIEEEEQDMIENVLEIKDTHVREVMTPLVDVVAIDGSSSLVDFHHLWVTHQYSRVPVFEQRVDNIMGIAYAMDLLDYVQKGELLESTTVVDMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGIVTLEDVVEEIVGEIFDENDSKEEIQKKTGYVVMRAEGIFDVDANTSIDQLSEDLNIKMPEGHQYETVSGFVCAAFGYIPRTGEFIKVVLEREDEDDNNEASAEQQDQKEKNQIFKLEILAGNARKVSAVRFERINNDEMLETKVTRMVPKIMKRKWISAENLEEDAEYDGDAFAKKPQDDSSGEKLVEQENSSSE* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2848 664 ProSiteProfiles CNNM transmembrane domain profile. 156 342 IPR002550 -
Pvu8g2848 664 ProSiteProfiles CBS domain profile. 428 486 IPR000644 -
Pvu8g2848 664 Gene3D - 498 601 IPR016169 -
Pvu8g2848 664 PANTHER HEMOLYSIN-RELATED 84 663 - -
Pvu8g2848 664 MobiDBLite consensus disorder prediction 637 664 - -
Pvu8g2848 664 SMART CorC_HlyC_2 501 604 IPR005170 -
Pvu8g2848 664 PANTHER BNAC03G73630D PROTEIN 84 663 - -
Pvu8g2848 664 ProSiteProfiles CBS domain profile. 361 422 IPR000644 -
Pvu8g2848 664 Pfam CBS domain 357 415 IPR000644 -
Pvu8g2848 664 Pfam CBS domain 428 480 IPR000644 -
Pvu8g2848 664 Gene3D - 336 491 IPR046342 -
Pvu8g2848 664 SUPERFAMILY CBS-domain pair 344 483 IPR046342 -
Pvu8g2848 664 Pfam Transporter associated domain 502 603 IPR005170 -
Pvu8g2848 664 SUPERFAMILY FAD-binding/transporter-associated domain-like 499 606 IPR036318 GO:0050660
Pvu8g2848 664 CDD CBS_pair_CorC_HlyC_assoc 356 477 IPR044751 -
Pvu8g2848 664 MobiDBLite consensus disorder prediction 637 655 - -
Pvu8g2848 664 Pfam Cyclin M transmembrane N-terminal domain 166 342 IPR002550 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2848 - - gmx:100778907 1144.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2848 8 58474461 58482457 Pvu8g2848 8 58474461 58482457 ECH