Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2828 ATGGAGTCATGGATGGGTTGGTTGCTTTTTCTGTGTTGCCATTCGTTGCTCTTTCACTTCTCATCCTCCCATTCCTTATGTCATCTTTATGAGAAAACTGTCTTACTCCAATTCAAGACCTCTTTCAGTGATAATGATTCTGATTTTCTTTGTGAGAATGTTGTTCCAAAGACTGTAACATGGAAAAATGCGACAGATTGTTGCTCATGGTCTGGGGTTACTTGCCACCCCATCTCTGGAAACATCATAGGTCTTGATCTCGCCTGTAGTGGTCTTTCAGGTGAACTCCATCCAAACACTACTCTTTTCCATCTTTCTCATCTTCAATCACTTAATCTTGCTTTTAATGATTTTTCTTCCTCACAATTATCATCTCTCTTTGGTGGGTTTGTGAGCCTCACACACCTCAATTTATCTGCTTCTGACATTCAAGAAACACTTGATCTCTCTTTTAATGGGTTAATATGGAAAGAGAGTAGTTGGAAGAAGTTCCTCCAAAATGCAACAATTTTAAGAGAGGTTATTTTGGATTATATAGATATGACTTTTAGTTCGATGAGGCCACTCAATCTATCTACCTCTTTGGTTAGTCTTAGTCTTAAAGATACTAGAGTTCAAAAAAACTTGAAAACTGACATCTTATGTTTGCCAAAACTTAAACAATTATGCTTGTCAGATAATAGAGTCAAGTACTTTCCAAACTTGAGTTGCAGTGCTACTTCTCTCACTATATTGGATCTTTCAATGAACAAGTTGGAGGGGACAATCCCTGCCTATTTCTCCAACTTCACCCATCTTAGTTTCCTCGATCTTTCATATAACTATCTTAACAATTCAATCCCATCCTCACTCTTAACCCTTCCACATCTAACTTTTTTATATCTTCAACTCAATAAATTCAGTGGTCAAATCCCAAATGTCTTTTCCCAATCAAATAGATTTCAAGAATTAGTTTTGCATTCTAATAGTATACGAGGTGAGCTACCATCAACACTTTCAAATCTTCAACATCTCAATCTCTTGGTTCTTTCATGGAATCAATTTAGTAACCAAATTCCATCCTCACTTTCAAATCTCCAACATCTTCTTCACTTGGATCTTTCACAGAATAAACTGAGTGGTCAAATTCCATCCTCATTTTCAAATCTTCAACATCTTATTGTCTTGGATCTTTCAGCGAATAAATTTTATGGTCAAATTCCATCCTCATTTTCAAATCTTCAACATCTTATTGTCTTGGATCTTTCAGCAAATAAATTTTGTGGTCAAATTCCATTGTCACTTTTAAATCTTCAACATCTCGATATCTTGTTTCTTTCAGAAAATAGATTGGAGGGCCCTCTGCCCAACAAAATAAGAGGGCTTTCAAACCTAACTCGTTTAACCTTGAATGACAACTTACTAGATGGAACAATTCCTGCTTGGTGTTTATCTTTGTCATTTTTGCAAGAATTGGATCTATCAAAGAATCAGTTCACAGGACATATACCTTCAATCTCATCTCAATCCTTGGAGTTTCTGAATTTGTGCTACAACAAGCTACATGGCAATATTCCACCATTAGTCTTCACCCTTGTGAACCTAACTGAATTATGTCTATCATCAAACAACTTTAGTGGGCTTCACAATTCTTCATTCTTCATCAACGCCCCTCGTTTAGAGATATTGTATTTATCTTCTGTCGGTTTAAATGAATTTCCAAAATTATTACAAAAAATCCCCATGTTGAGAGAGATAGACCTATCCAACAACAAATTGAATGGAATAGTGCCTGAGTGGTTACATGAAATGGATTCATTACAATTTTTGGACCTATCCAACAACTTGTTGACAACTCCAATGAACAAATTCTCAAGGAACTGCAATCTCCAGTTCCTTGATATTAGTTTCAATTTACTCATTGGTGACATATCTTCCTCAATTTGTAATGTAAGTAGTCTTCAAGTTCTGATCTTGTCTTACAATAAGTTGACAAGCGTCATTCCACCATGCCTTGCAAACTTGCGGGATCTTTATATTTTGGATCTAGAAAGGAACAAACTAGACGACACTTTACCAACTAACTTTTCAATTAATAGTGGTCTCACTTTTTTGAATCTCAATAACAACCAATTGGAAGGTCCTTTGCCAAAATCTTTGTCCAATTGCACACAACTGGAGATCTTGAATATTGGCAACAATCAAATTGAGGATAAATTTCCTCATTGGCTTCAAACTCTACTAATGTTGACAATATTGGTATTGCGAGCCAACAAATTTTACGGTCGCGTTGCCGATTTAAAGACAGAGTATGGTTTTTCTCGTATAGTTATTTTTGATATCTCATCCAACTATTTCAATGGTCCAATACCAAAATCCTATATACAAAATTTTAAAGCCATGAAGAATGTCATTCAATATAAAGGGGGAGAGCAATACAAGAAAATGCCACTTATGTCACTTAATGCATCCAAAAGTGAAATAGATGAGTCTGTAACTGTCACAACAAAAGCGATAAGACTCAACTTTTCCCATAACAAATTAAGTGGTCTTATTCCCAAATCCATTGGATATTTGACAAACTTAGAATCATTGGATCTCTCCTCAAATATGTTCAATGGTAGGATTCCAACAGAATTAACCAATCTGAACTTTCTTGAAGTCATGAATCTTTCCAATAACCAGCTTGTGGGAGAAATACCTCAAGGAAAACAGTTTGCGACTTTTTCAAATGAATCTTACCTAGGAAACTCGGGATTATATGGGTTTCCGTTGTCAGTGAATTGCAACAACACTAAACAAAAATCTCCATCTTCTCCTAGCTTATTGGGTAAAGAGAGATTTGGATTTGGATGGGAACCAGTGGTTATAGGATTTGGATGTGGAATGATATTTGGATTTTGCTTGGGATATTTGTATTGTAGGAAAGTTTGA 2913 0.3563 MESWMGWLLFLCCHSLLFHFSSSHSLCHLYEKTVLLQFKTSFSDNDSDFLCENVVPKTVTWKNATDCCSWSGVTCHPISGNIIGLDLACSGLSGELHPNTTLFHLSHLQSLNLAFNDFSSSQLSSLFGGFVSLTHLNLSASDIQETLDLSFNGLIWKESSWKKFLQNATILREVILDYIDMTFSSMRPLNLSTSLVSLSLKDTRVQKNLKTDILCLPKLKQLCLSDNRVKYFPNLSCSATSLTILDLSMNKLEGTIPAYFSNFTHLSFLDLSYNYLNNSIPSSLLTLPHLTFLYLQLNKFSGQIPNVFSQSNRFQELVLHSNSIRGELPSTLSNLQHLNLLVLSWNQFSNQIPSSLSNLQHLLHLDLSQNKLSGQIPSSFSNLQHLIVLDLSANKFYGQIPSSFSNLQHLIVLDLSANKFCGQIPLSLLNLQHLDILFLSENRLEGPLPNKIRGLSNLTRLTLNDNLLDGTIPAWCLSLSFLQELDLSKNQFTGHIPSISSQSLEFLNLCYNKLHGNIPPLVFTLVNLTELCLSSNNFSGLHNSSFFINAPRLEILYLSSVGLNEFPKLLQKIPMLREIDLSNNKLNGIVPEWLHEMDSLQFLDLSNNLLTTPMNKFSRNCNLQFLDISFNLLIGDISSSICNVSSLQVLILSYNKLTSVIPPCLANLRDLYILDLERNKLDDTLPTNFSINSGLTFLNLNNNQLEGPLPKSLSNCTQLEILNIGNNQIEDKFPHWLQTLLMLTILVLRANKFYGRVADLKTEYGFSRIVIFDISSNYFNGPIPKSYIQNFKAMKNVIQYKGGEQYKKMPLMSLNASKSEIDESVTVTTKAIRLNFSHNKLSGLIPKSIGYLTNLESLDLSSNMFNGRIPTELTNLNFLEVMNLSNNQLVGEIPQGKQFATFSNESYLGNSGLYGFPLSVNCNNTKQKSPSSPSLLGKERFGFGWEPVVIGFGCGMIFGFCLGYLYCRKV* 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2828 970 Pfam Leucine rich repeat N-terminal domain 30 75 IPR013210 -
Pvu8g2828 970 ProSiteProfiles Leucine-rich repeat profile. 218 239 IPR001611 GO:0005515
Pvu8g2828 970 SUPERFAMILY RNI-like 85 373 - -
Pvu8g2828 970 Pfam Leucine Rich Repeat 695 716 IPR001611 GO:0005515
Pvu8g2828 970 Pfam Leucine Rich Repeat 362 383 IPR001611 GO:0005515
Pvu8g2828 970 Gene3D Ribonuclease Inhibitor 502 930 IPR032675 -
Pvu8g2828 970 Gene3D Ribonuclease Inhibitor 25 144 IPR032675 -
Pvu8g2828 970 SMART LRR_sd22_2 525 543 - -
Pvu8g2828 970 SMART LRR_sd22_2 431 457 - -
Pvu8g2828 970 SMART LRR_sd22_2 359 385 - -
Pvu8g2828 970 SMART LRR_sd22_2 239 265 - -
Pvu8g2828 970 SMART LRR_sd22_2 852 878 - -
Pvu8g2828 970 SMART LRR_sd22_2 692 718 - -
Pvu8g2828 970 SMART LRR_sd22_2 620 646 - -
Pvu8g2828 970 SMART LRR_sd22_2 216 237 - -
Pvu8g2828 970 Gene3D Ribonuclease Inhibitor 145 501 IPR032675 -
Pvu8g2828 970 SUPERFAMILY L domain-like 545 795 - -
Pvu8g2828 970 PRINTS Leucine-rich repeat signature 576 589 - -
Pvu8g2828 970 PRINTS Leucine-rich repeat signature 852 865 - -
Pvu8g2828 970 PANTHER RECEPTOR-LIKE PROTEIN KINASE 2 9 474 - -
Pvu8g2828 970 PANTHER RECEPTOR-LIKE PROTEIN KINASE 2 341 689 - -
Pvu8g2828 970 PANTHER RECEPTOR-LIKE PROTEIN KINASE 2 686 925 - -
Pvu8g2828 970 PANTHER RECEPTOR-LIKE PROTEIN KINASE 2 479 807 - -
Pvu8g2828 970 Pfam Leucine rich repeat 241 299 IPR001611 GO:0005515
Pvu8g2828 970 Pfam Leucine rich repeat 622 681 IPR001611 GO:0005515
Pvu8g2828 970 Pfam Leucine rich repeat 551 610 IPR001611 GO:0005515
Pvu8g2828 970 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 9 474 - -
Pvu8g2828 970 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 686 925 - -
Pvu8g2828 970 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 341 689 - -
Pvu8g2828 970 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 479 807 - -
Pvu8g2828 970 SMART LRR_typ_2 263 287 IPR003591 -
Pvu8g2828 970 SMART LRR_typ_2 525 548 IPR003591 -
Pvu8g2828 970 SMART LRR_typ_2 216 239 IPR003591 -
Pvu8g2828 970 SMART LRR_typ_2 359 382 IPR003591 -
Pvu8g2828 970 SMART LRR_typ_2 597 620 IPR003591 -
Pvu8g2828 970 SMART LRR_typ_2 573 596 IPR003591 -
Pvu8g2828 970 SMART LRR_typ_2 668 692 IPR003591 -
Pvu8g2828 970 SMART LRR_typ_2 407 431 IPR003591 -
Pvu8g2828 970 SMART LRR_typ_2 383 406 IPR003591 -
Pvu8g2828 970 SMART LRR_typ_2 852 876 IPR003591 -
Pvu8g2828 970 SMART LRR_typ_2 479 503 IPR003591 -
Pvu8g2828 970 SMART LRR_typ_2 105 129 IPR003591 -
Pvu8g2828 970 SMART LRR_typ_2 335 358 IPR003591 -
Pvu8g2828 970 SMART LRR_typ_2 455 478 IPR003591 -
Pvu8g2828 970 SMART LRR_typ_2 644 667 IPR003591 -
Pvu8g2828 970 SUPERFAMILY L domain-like 822 917 - -
Pvu8g2828 970 SUPERFAMILY RNI-like 280 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2828 Pvu-Chr8 58335499 58338558 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2828 180 963 Receptor kinase-like Gene Family AT2G15080 35.906 1.48e-126 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2828 - - vun:114194026 1146.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2828 8 58335499 58338558 Pvu8g2828 8 58335499 58338558 ECH