Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2827 ATGGAGTCATGGGTAGGTTGGTTTCTTCTTTTATTTTCCCATTTGTTTCTCTTTCACTTCTCATTCTCCCATTCTTTATGTCATCTTCACGATAAAATTGCGTTGCTCCAATTCAAAAACTCTCTCACTTATGATCATGACTATGGCTTTATGTCTAGTTGTTATAATTTTGTTCCAAAGACGTCAACATGGAAAAATGGAACAGATTGTTGCTCATGGTATGGGGTTACTTGTCACCCCATCTCTGGTCACGTCATAGGCCTTGACCTCAACTGCAATCATCTTTCAGGTGAAATTCATCCAAACACTTCTCTTTTTCGTCTTTCTCATATTCAATCACTTAATCTTGCTTGCAATGATATTTTCTTCTCTCCTTTATCATCTTTCCTTGGTGGGTTTGTGAGCCTCACACACCTCAATCTATCTACAACTCGCATTCAAGGTGAAATTCCCTCCCAAATCTCACAACTTTCCAAATTAGAAACACTCGACCTCTCTTCTAATATGTTCTTAACGTGGAAAGAAAGCATTTTGAAGAAGTTCCTCCAAAATACAACAGTTTTAAGGGAACTCATTTTGGATTATGTATATATTACTTCTAGTTCGATGAGACCACTCAATGTGTCTACCTCTTTGGTTAGTCTTAGTCTTAGAAACACTGGAGTTCGACAAAACTTGAAAACTGACATATTTTGTTTACCAAAACTTAAACACTTATGGTTGTCAGATAATAGTCTCAAGCAATTTCCGAACTTGAGTTGCAGTGCTGCTTCTCTCACTATATTGGATCTTTCATGGAACATGTTGGAGGGGACAATCCCTGCCTCTTTCTCCAACTTCACACATCTTACTTCAGTTGATCTCTCACATAACTATCTCAATGATTCAATCACATCCTCACTCTTAACCCTTCCACATCTATGTTTTTTGGATCTTAGATTCAATCAATTCAGTGGCCAAATCCCGAATGTCTTTTCTCAGTCAAACAAATTTCAAGAATTACATTTAAGTGCTAACACTATAGGAGGTGAGCTACCATCAACACTTTCAAATCTTACACATCTCCTACTCTTGGATCTTTCAATGAATCAATTTAGTGGCCAAATTCCATCCTCACTTTCAAATCTTAGGCATCTCCTTCTCTTGGATCTTTCAAAGAATCAATTTAGTGGCCAAATTCCATCATCACTTTCAAATCTTCAACACCTTATTTACTTGGACCTTTCACAAAATAAATTTAGTGGCCAAATTCCATCCTCACTTTCAAATCTTCAACATCTTTTTCACTTGGATCTTTCAGAGAATAGATTGGAGGGTCCTCTACCCAACAAAATAACAGGTCTTTCAAACCTAACTCGATTATCCTTCAATGACAACTTACTAAATGGGACAATTCCTGCTTGGTGTTTATCTTTGCCATTTTTGCAAGAATTGCATCTATCAGATAATCAGTTCACAGGGCATATACCGTCAATGTCATCTCAATCCTTGAAGTCTCTGTATTTGTGCTACAACAAGCTGCATGGCAATATTCCACCATCATTCTTCACCCTTGTAAACCTAACTCAATTATGTCTATCGTCAAACAATTTCAGTGGTCTTCATAACACTTCATTCTTCACCAACATCAATTGCAAATTCCCTCACTTAGAGATATTGTATTTATCTTCTATGGGTTTGACTGAATTTCCAAAATTATCAGGAAAATTCTCAATGTTGACACGACTTGATCTATCCAACAACAAATTGAATGGAACAGTGCCCAAATGGTTACATGAAATGGGTTTATTAAATTTTTTGAACCTATCCCACAACTTGTTGGAAACTCCAATGAACCAATTCTTAATGAACTACAACCTCGAGATCATTGATCTTAGTTTCAATTTACTCATTGGCGGCGTGTCTTCCTCATTGTGTAATATAATTTTTCTTTGGGTTCTCATCTTGTCCCACAATAAGTTGACAGGTGCCATTCCACCATGCCTGAATAACCCTTATATTTTGGATTTGCAAATGAACAAACTAAATGGCACCTTACCAAATAACTTCTCAGTGGGTAGTGAGCTCATTTATTTTAATGTTAATGACAACCAATTGGAAGGTCCTTTGCCAAAATCTTTGTCCAATTGCACACGATTGAAGATCTTGAATCTTGGAAACAATCAAATTGAAGATAAATTTCCTCATTGGCTTCAAACTCTACCAATGTTGTCAGTATTGGTATTGCGAGCCAACAAATTGTACGGTCCCATTGAAGGTTCAAAGACGGAGCATGGGTTTTCAAGTATAATTATTTTTGATATCTCATCCAACTATTTCAATGGTCCAATACCAAAATCCTATATACAAAGTTTTAAAGCCATGAAGAATGTCAATCCATATAAAGGGAGCCAGCTATACATGGACATACCACTTATGTCACTTAATAAGTCCAAAAGTGTTACAGTTGGATTTGTATCTGTAACAACAAAAGCGATAAGTATGACACTAAAAAAAGTTCCAAAAAACTTTGTAACCATTGATTTATCCCAAAACAAATTTGAAGGACAAATTCCATATGTAATTGGAGAGCTTCATGCTCTTAGAGGACTCAACTTTTCCCATAACAAACTTAGTGGTCATATTCCCAAATCCATTAAAGATTTGACAAACTTAGAATCATTGGATCTCTCCTCAAATATGTTGTCCGGTAGGATTCCAACAGAATTAACCAATTTGAACTTTCTTGAAGTCCTGAATCTTTCCCAGAACCATCTTGTGGGAGAAATACCTAAAGGAAAACAGTTTGACACTTTTTCAAACGACTCCTATGTAGGAAACTCGGGATTATGTGGATTTCCATTGTCAATGAATTGCAACAACACTGAACAAAAATCTCCATCTTTTCCAAGCTTCTGGGGAGAAGAGAGATTTGGATTTGGATGGGAACCAGTGGTTATAGGATATGGATGTGGAATGATATTTGGAATTGGCCTTGGATTTTTGTATTGTAGGAAAGCTTGA 3003 0.3636 MESWVGWFLLLFSHLFLFHFSFSHSLCHLHDKIALLQFKNSLTYDHDYGFMSSCYNFVPKTSTWKNGTDCCSWYGVTCHPISGHVIGLDLNCNHLSGEIHPNTSLFRLSHIQSLNLACNDIFFSPLSSFLGGFVSLTHLNLSTTRIQGEIPSQISQLSKLETLDLSSNMFLTWKESILKKFLQNTTVLRELILDYVYITSSSMRPLNVSTSLVSLSLRNTGVRQNLKTDIFCLPKLKHLWLSDNSLKQFPNLSCSAASLTILDLSWNMLEGTIPASFSNFTHLTSVDLSHNYLNDSITSSLLTLPHLCFLDLRFNQFSGQIPNVFSQSNKFQELHLSANTIGGELPSTLSNLTHLLLLDLSMNQFSGQIPSSLSNLRHLLLLDLSKNQFSGQIPSSLSNLQHLIYLDLSQNKFSGQIPSSLSNLQHLFHLDLSENRLEGPLPNKITGLSNLTRLSFNDNLLNGTIPAWCLSLPFLQELHLSDNQFTGHIPSMSSQSLKSLYLCYNKLHGNIPPSFFTLVNLTQLCLSSNNFSGLHNTSFFTNINCKFPHLEILYLSSMGLTEFPKLSGKFSMLTRLDLSNNKLNGTVPKWLHEMGLLNFLNLSHNLLETPMNQFLMNYNLEIIDLSFNLLIGGVSSSLCNIIFLWVLILSHNKLTGAIPPCLNNPYILDLQMNKLNGTLPNNFSVGSELIYFNVNDNQLEGPLPKSLSNCTRLKILNLGNNQIEDKFPHWLQTLPMLSVLVLRANKLYGPIEGSKTEHGFSSIIIFDISSNYFNGPIPKSYIQSFKAMKNVNPYKGSQLYMDIPLMSLNKSKSVTVGFVSVTTKAISMTLKKVPKNFVTIDLSQNKFEGQIPYVIGELHALRGLNFSHNKLSGHIPKSIKDLTNLESLDLSSNMLSGRIPTELTNLNFLEVLNLSQNHLVGEIPKGKQFDTFSNDSYVGNSGLCGFPLSMNCNNTEQKSPSFPSFWGEERFGFGWEPVVIGYGCGMIFGIGLGFLYCRKA* 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2827 1000 Gene3D Ribonuclease Inhibitor 495 537 IPR032675 -
Pvu8g2827 1000 Gene3D Ribonuclease Inhibitor 538 618 IPR032675 -
Pvu8g2827 1000 Gene3D Ribonuclease Inhibitor 443 494 IPR032675 -
Pvu8g2827 1000 Pfam Leucine rich repeat N-terminal domain 30 78 IPR013210 -
Pvu8g2827 1000 PANTHER UNNAMED PRODUCT 547 976 - -
Pvu8g2827 1000 PANTHER UNNAMED PRODUCT 9 533 - -
Pvu8g2827 1000 PANTHER UNNAMED PRODUCT 437 790 - -
Pvu8g2827 1000 PRINTS Leucine-rich repeat signature 573 586 - -
Pvu8g2827 1000 PRINTS Leucine-rich repeat signature 882 895 - -
Pvu8g2827 1000 SUPERFAMILY RNI-like 297 630 - -
Pvu8g2827 1000 SMART LRR_sd22_2 352 378 - -
Pvu8g2827 1000 SMART LRR_sd22_2 448 463 - -
Pvu8g2827 1000 SMART LRR_sd22_2 518 536 - -
Pvu8g2827 1000 SMART LRR_sd22_2 617 636 - -
Pvu8g2827 1000 SMART LRR_sd22_2 233 254 - -
Pvu8g2827 1000 SMART LRR_sd22_2 256 282 - -
Pvu8g2827 1000 SMART LRR_sd22_2 882 908 - -
Pvu8g2827 1000 SMART LRR_sd22_2 400 426 - -
Pvu8g2827 1000 ProSiteProfiles Leucine-rich repeat profile. 235 256 IPR001611 GO:0005515
Pvu8g2827 1000 Pfam Leucine rich repeat 691 747 IPR001611 GO:0005515
Pvu8g2827 1000 Pfam Leucine rich repeat 394 437 IPR001611 GO:0005515
Pvu8g2827 1000 Pfam Leucine rich repeat 110 169 IPR001611 GO:0005515
Pvu8g2827 1000 Pfam Leucine rich repeat 548 607 IPR001611 GO:0005515
Pvu8g2827 1000 Pfam Leucine rich repeat 839 895 IPR001611 GO:0005515
Pvu8g2827 1000 Pfam Leucine rich repeat 258 317 IPR001611 GO:0005515
Pvu8g2827 1000 SMART LRR_typ_2 233 256 IPR003591 -
Pvu8g2827 1000 SMART LRR_typ_2 570 598 IPR003591 -
Pvu8g2827 1000 SMART LRR_typ_2 472 496 IPR003591 -
Pvu8g2827 1000 SMART LRR_typ_2 352 375 IPR003591 -
Pvu8g2827 1000 SMART LRR_typ_2 858 881 IPR003591 -
Pvu8g2827 1000 SMART LRR_typ_2 304 327 IPR003591 -
Pvu8g2827 1000 SMART LRR_typ_2 157 180 IPR003591 -
Pvu8g2827 1000 SMART LRR_typ_2 376 400 IPR003591 -
Pvu8g2827 1000 SMART LRR_typ_2 518 541 IPR003591 -
Pvu8g2827 1000 SMART LRR_typ_2 424 448 IPR003591 -
Pvu8g2827 1000 SMART LRR_typ_2 108 131 IPR003591 -
Pvu8g2827 1000 SMART LRR_typ_2 882 906 IPR003591 -
Pvu8g2827 1000 Gene3D Ribonuclease Inhibitor 24 122 IPR032675 -
Pvu8g2827 1000 Gene3D Ribonuclease Inhibitor 123 442 IPR032675 -
Pvu8g2827 1000 Gene3D Ribonuclease Inhibitor 619 960 IPR032675 -
Pvu8g2827 1000 SUPERFAMILY L domain-like 47 365 - -
Pvu8g2827 1000 SUPERFAMILY L domain-like 545 937 - -
Pvu8g2827 1000 Pfam Leucine Rich Repeat 235 254 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2827 Pvu-Chr8 58313883 58316885 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2827 6 993 Receptor kinase-like Gene Family AT2G15080 34.951 9.80e-136 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2827 - - vun:114194026 1312.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2827 8 58313883 58316885 Pvu8g2827 8 58313883 58316885 ECH