Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2825 ATGGATCTACACATCCAGAATATTCAACAAACAACGTCTTCCGGAAGATCCGTATTAAGTCAGTCCTACCAGAGACTAACACCTGATCCAAAGATTATCAGCGAATCCAACAGAAAAGATCAGGGTGAAATCCATCCAAACACTTCTCTTTTCCGTCTTTCTCATCTTCAATCACTTAATCTTACTTTCAATTACTTTTACTCCTCTCAATTATCATTTCCTTCTGTTGGGTTAATGTGGAAAGAAAACAGTTGGAAGAAGTTCCTTCAAAATGCAACAGTTTTAGCGGAGCTTATTTTGGATGGTGTAAATATGACTTTTAGTTCGATGAGGTCACTCAATCTATCTACCTCTTTGGTTAATCTTAGTCTTAAATACACCGGAGTTCAGGAAAACTTGAAAACTGACATCTTATGTTTACCAAAACTTAAACACTTATGGTTGTCAGATAATAGTCTTGAGCAGTTTCCTAACTTGAGTTGCAGTGCTGCTTCTCTCACTATGTTGGATCTTTCAAGGAACATGTTGGAGGGGACAATCCCTGCCTCTTTCTCCAACTTCACACATATTACGTTCCTCGATCTCTCAAACAACTTACTAAATGGGACAATTCCTACTTGGTGTTTATCTTTGCCATTTTTGCAAGAATTGGATCTATCAGAGAATCAGTTCACAGGCCATATACCTTCAATCTCATCTCAATCCTTGAAGTCTCTATATTTGTGCTACAACAAGCTACATGGCAATATTCCACAATCAGTCTTCACCCTTGTAAACCTAACTCACTTATGTCTATCATCAAACAACTTCAATGGTCTTCATAACTATACAATTTTCACCAATGCTCCTCTCTTAGAGAGATTGTATTTATCTTCTGTGGGTTTAACTGAATTTCCAAAATTACTAGGAAAAATCCCAATTTTGATAGAGCTTGATCTATCCAACAACAAATTGAATGGAACAATGCCCAAGTGGTTACATGAAATGGGTTCATTACAATTTTTGAGCCTATCCCACAACTTGTTGACAACTCCAATAAACCAATTCTCAAGGAACTACAACCTCAATATCCTTGATATTAGTTTCAATTTACTCACTGGTGACATGTCTTCCTCAATTTGTAATGCAAGTAATCTTCAAGTTCTCATCTTGTCCCACAATAAGTTGACAGGCGTCATTCCACCATGCCTTGCAAACTTGTGGGGCCTTTATATTTTGGATCTACAGAGGAACAAACTAAATGGCACTTTACCAAATAACTTCTCAATGAATAGTGAGCTCGCTTATTTTAATGTTAATGACAACCAATTGGAAGGTCCTTTGCCAAAATCTTTGTCCAATTGCACACAGTTGGAGATCTTGAATCTTGGCAACAATCAAATTGAGGATAAATTTCCCCATTGGCTTCAAACTCTACCAATGTTGACAGTATTGGTTTTGCGATCCAACAAATTGTACGGTCCCATTGACGATTTAGAGACGCAGTATGAATTTTCAAGTATAGTTATTTTTGATATCTCATCCAACTATTTCAATGGTCCAATACCAAAAACCTATATACAAAATTTTAAAGCCATGAAGAATGTCATTTCATATGAAGGGGATGAGCTATACATTGGCATTACATATATGCCATATAATGGGTCCCAAAGAGGTACAATTGGATATGTAACTGTAACAACAAAAGCGATAAGTATGACATTGAAACAAATTCCGAAAAACTTTGTAACCATTGATTTATCCCAAAACAAATTTCAAGGACAAATTCCATATGTAATTGGAGAGCTTCATGCTCTTAGAGGACTCAATTTTTCCCATAACAGATTAAGTGGTCTTATTCCCAAATCCATTGGATATTTGACAAATTTAGAATCAATGGATCTCTCCTCAAATATGTTTACTGGTAGGATTCCAACAGAATTAACCAATCTGAACTATCTTGAAGTCCTGAATCTTTCCAATAACCAGCTTGTGGGAGAAATACCTCAAGGAAAACAGTTTGCGACTTTTTCAAATGACTCCTACCTAGGAAACTCGGGATTATGTGGGTTCCCATTGTCAATGAGTTGCAACAACACTGAACAAAAACCTCCATCTTCTCCGAGCTTATTGGGAGAAGAGAGATTTGGATTTGGATGGGAACCAGTGGTTATAGGATATGGATGTGGAATGATATTTGGAATTGGCCTCAGACTTTTGTATTATAGGAAAACTTGA 2217 0.3658 MDLHIQNIQQTTSSGRSVLSQSYQRLTPDPKIISESNRKDQGEIHPNTSLFRLSHLQSLNLTFNYFYSSQLSFPSVGLMWKENSWKKFLQNATVLAELILDGVNMTFSSMRSLNLSTSLVNLSLKYTGVQENLKTDILCLPKLKHLWLSDNSLEQFPNLSCSAASLTMLDLSRNMLEGTIPASFSNFTHITFLDLSNNLLNGTIPTWCLSLPFLQELDLSENQFTGHIPSISSQSLKSLYLCYNKLHGNIPQSVFTLVNLTHLCLSSNNFNGLHNYTIFTNAPLLERLYLSSVGLTEFPKLLGKIPILIELDLSNNKLNGTMPKWLHEMGSLQFLSLSHNLLTTPINQFSRNYNLNILDISFNLLTGDMSSSICNASNLQVLILSHNKLTGVIPPCLANLWGLYILDLQRNKLNGTLPNNFSMNSELAYFNVNDNQLEGPLPKSLSNCTQLEILNLGNNQIEDKFPHWLQTLPMLTVLVLRSNKLYGPIDDLETQYEFSSIVIFDISSNYFNGPIPKTYIQNFKAMKNVISYEGDELYIGITYMPYNGSQRGTIGYVTVTTKAISMTLKQIPKNFVTIDLSQNKFQGQIPYVIGELHALRGLNFSHNRLSGLIPKSIGYLTNLESMDLSSNMFTGRIPTELTNLNYLEVLNLSNNQLVGEIPQGKQFATFSNDSYLGNSGLCGFPLSMSCNNTEQKPPSSPSLLGEERFGFGWEPVVIGYGCGMIFGIGLRLLYYRKT* 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2825 738 Pfam Leucine Rich Repeat 142 161 IPR001611 GO:0005515
Pvu8g2825 738 PRINTS Leucine-rich repeat signature 308 321 - -
Pvu8g2825 738 PRINTS Leucine-rich repeat signature 644 657 - -
Pvu8g2825 738 ProSiteProfiles Leucine-rich repeat profile. 142 163 IPR001611 GO:0005515
Pvu8g2825 738 Gene3D Ribonuclease Inhibitor 350 698 IPR032675 -
Pvu8g2825 738 MobiDBLite consensus disorder prediction 1 23 - -
Pvu8g2825 738 SMART LRR_typ_2 620 644 IPR003591 -
Pvu8g2825 738 SMART LRR_typ_2 377 400 IPR003591 -
Pvu8g2825 738 SMART LRR_typ_2 140 163 IPR003591 -
Pvu8g2825 738 SMART LRR_typ_2 257 281 IPR003591 -
Pvu8g2825 738 SMART LRR_typ_2 596 619 IPR003591 -
Pvu8g2825 738 SMART LRR_typ_2 329 351 IPR003591 -
Pvu8g2825 738 SMART LRR_typ_2 211 235 IPR003591 -
Pvu8g2825 738 Gene3D Ribonuclease Inhibitor 157 233 IPR032675 -
Pvu8g2825 738 PANTHER RECEPTOR-LIKE PROTEIN 41 730 - -
Pvu8g2825 738 SUPERFAMILY RNI-like 48 274 - -
Pvu8g2825 738 PANTHER RECEPTOR-LIKE PROTEIN 12 ISOFORM X1 41 730 IPR045273 -
Pvu8g2825 738 SMART LRR_sd22_2 163 189 - -
Pvu8g2825 738 SMART LRR_sd22_2 620 646 - -
Pvu8g2825 738 SMART LRR_sd22_2 140 161 - -
Pvu8g2825 738 SMART LRR_sd22_2 257 275 - -
Pvu8g2825 738 SMART LRR_sd22_2 352 378 - -
Pvu8g2825 738 Gene3D Ribonuclease Inhibitor 234 349 IPR032675 -
Pvu8g2825 738 Gene3D Ribonuclease Inhibitor 13 156 IPR032675 -
Pvu8g2825 738 SUPERFAMILY RNI-like 204 531 - -
Pvu8g2825 738 Pfam Leucine rich repeat 577 632 IPR001611 GO:0005515
Pvu8g2825 738 Pfam Leucine rich repeat 284 342 IPR001611 GO:0005515
Pvu8g2825 738 Pfam Leucine rich repeat 165 224 IPR001611 GO:0005515
Pvu8g2825 738 Pfam Leucine rich repeat 354 413 IPR001611 GO:0005515
Pvu8g2825 738 Pfam Leucine rich repeat 426 485 IPR001611 GO:0005515
Pvu8g2825 738 SUPERFAMILY L domain-like 571 673 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2825 Pvu-Chr8 58300481 58306015 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2825 41 730 Receptor kinase-like Gene Family AT2G32660 35.000 6.30e-107 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2825 - - pvu:PHAVU_008G273700g 1477.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2825 8 58300481 58306015 Pvu8g2825 8 58300481 58306015 ECH