Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2824 ATGGAGTCATGGGTGGGGTGGTTGCTTTTTCTGTGTTGCCATTCGTTGCTCTTTCACTTCTCATCCTCCCATTCCTTATGTCATCTTCATGAGAGAACTGCCTTGCTCCAATTCAAGACCTCTTTCAGTGATAATGATTCTGATTTTCTTTGTGAGAATGTTGTTCCAAAGACCGTAACATGGGAAAATGCGACAGATTGTTGCTCATGGTCTGGGGTTACTTGCCACCCCATTTCTGGAAACATCATAGGTCTTGATCTCGCCTGCAGTGGTCTTTCAGGTGAACTCCATCCAAACACTACTCTTTTTCGTCTTTCTCATCTTCAATCACTTAATCTTGCTTTAAATGACTTTTCCTCCTCTCGATTGTCGTCTCTCTTTGGTGGGTTTGTGAGCCTCACACACCTTAATCTGTCTAGAAATTTTTTCCTTGAAGGTGAAATTCCTTCCCAAATCTCACAACTTTCCAAATTAGAATCACTTGATCTATCTTTTACTATGTTAACGTGGAAAGAAAACAGTTGGAAGAAGTTCCTCCAAAATGCAACAATTTTAGAGGAGCTTATTTTGGATTATGTAAATATGACTTTTAGTTCGATGAGGCCACTCAATCTATCTACCTCTTTGGTTAATCTTAGTCTTAAATACACCGGAGTTCAGGAAAACTTGAAAACTGACATCTTATGTTTACCAAAACTTAAACACTTATGGTTGTCACGTAATACTCTCGAGCAGTTTCCGAACTTGAGTTGCAGTACTACTACTCTCACTATATTGGATCTTTCATGGAACATGTTGGAGGGGACAATCCCTGCCTCTTTATCCAACTTCACACATCTTACTTTCCTCGATCTCTCAATTAACTATCTCAACGATTCAATCCCATCCTCAATCTTAACCCTTCCACATCTAACATTTTTGGATCTTCGAAACAATCGATTCAGTGGCCAAATTCCATCATCACTTTCAAATCTTCAACATCTTCTTCACTTGGATCTTTCAGAGAATAGATTGGAGGGCCCTCTACCTAGCAAAGTAACCGGGCTTTCAAATCTAACTTTTTTATCCCTCAAAGACAACCTATTGAATGGGACAATTCCTGCTTGGTGTTTATCTTTGCCATTTTTGCAAGAACTGGATCTATCAAAGAATCAATTCACAGGCCATACACCTTCAATCTTAGCTCAATCCTTGGAGTCTTTGTATTTGTGCTACAACAAGTTACAGGGAAATATTCCACAACCAGTCTTCATCCTTGCAAACCTTACTCAATTATGTCTATCGTCAAATAACTTTAGTGGTCTTCATAACTCTCCAATCTTCACCAACGCCCCTAACTTAGAGCTTTTGTATTTATCTTCTGTAGGTTTAACTAAATTTCCAAAATTATCAGGAAAAATCCCAATGTTGATAGATCTTGATCTATCCGATAACAAATTGAATGGAGCAGTGCCCGAGTGGTTACACAAAGTTGATTCATTACAAAGTTTGAACCTATCCCACAACTTGTTGAAAACTCCAATGAACGAATTCTCAAGGAACTACAACCTCAAGTTCCTTGATATTAGTTTCAATTTACTCATTGGCGACATGTCTTCCTCAATTTGTAATGTAAGTAATCTTCAAGTTCTTGTCTTGTCTCACAATAAGTTGACAGGCATCATTCCATCATGTCTTGTAAACTTGCAAACCCTTTTTATTTTGGATCTAAAAAATAACCAACTAAATGGCACTTTACCAACTACCTTTTCAATGAATACTGATCTCACTTTTTTGAATCTCAATAACAACCAATTGGAAGGTCCTTTGCCAAAATCTTTGTCCAATTGCACAGAGTTGGAGATCTTGAATCTTGGCAACAATCAAATTGAGGATAAATTTCCCCATTGGCTTCAAACTCTACCAATGTTGACAGTATTGGTTTTGCGAGCCAACAAATTGTACGATCCCATTGACGATTTAAAGACGGAGCATGGATTTTCAAGTATAATTATTTTTGATATCTCATCCAACTATTTCAATGGTCCAATACCCAAAACCTATATACAAAATTTTAAAGCCATGAAGAATGTCATTCAATATGAAGGGGACGAGATATACATGGACACATCACCTACGTTAGTTAAAGCATCCCCGATTCTTGTGATTGAATTTATAGCTATGCATATATATGAATCTGTAACTGTAACAACAAAAGCAATAAGTATGACACTCAATAAAATTCCAATAAACTTTGTAACCATTGATTTATCTCAAAACAAATTTGAAGGACAAATTCCAGATGTGATTGGAGAGCTTCATGCTCTTAGAGGACTCAACTTTTCCCATAACAGATTAAGTGGTCTTATTCCCAAATCCATTGGATATTTGACAAACTTAGAATCATTGGATCTCTCTTCGAATATGTTCATCGGTAGGATTCCAACAGAATTAACCAATTTGAACTCTCTTGAAGTCCTGAATCTTTCCAATAACCTGCTTGTGGGAGAAATACCTCAAGGAAAACAGTTTGCGACTTTTTCAAATGACTCATACCTTGGAAACTCGGGATTATATGGATTCCCATTGTCAATGAATTGCAACAACACTATACAAAAATCTCCATTTTCTCCGAGCTTATTGGGAGAAGAGAGATTTGGATTTGGATGGGAATCAGTGGTTATAGGATATGGATGTGGAATGATATTTGGAATTGGCCTCGGACTTTTGTATTATAGGAAAGCTTGA 2727 0.3711 MESWVGWLLFLCCHSLLFHFSSSHSLCHLHERTALLQFKTSFSDNDSDFLCENVVPKTVTWENATDCCSWSGVTCHPISGNIIGLDLACSGLSGELHPNTTLFRLSHLQSLNLALNDFSSSRLSSLFGGFVSLTHLNLSRNFFLEGEIPSQISQLSKLESLDLSFTMLTWKENSWKKFLQNATILEELILDYVNMTFSSMRPLNLSTSLVNLSLKYTGVQENLKTDILCLPKLKHLWLSRNTLEQFPNLSCSTTTLTILDLSWNMLEGTIPASLSNFTHLTFLDLSINYLNDSIPSSILTLPHLTFLDLRNNRFSGQIPSSLSNLQHLLHLDLSENRLEGPLPSKVTGLSNLTFLSLKDNLLNGTIPAWCLSLPFLQELDLSKNQFTGHTPSILAQSLESLYLCYNKLQGNIPQPVFILANLTQLCLSSNNFSGLHNSPIFTNAPNLELLYLSSVGLTKFPKLSGKIPMLIDLDLSDNKLNGAVPEWLHKVDSLQSLNLSHNLLKTPMNEFSRNYNLKFLDISFNLLIGDMSSSICNVSNLQVLVLSHNKLTGIIPSCLVNLQTLFILDLKNNQLNGTLPTTFSMNTDLTFLNLNNNQLEGPLPKSLSNCTELEILNLGNNQIEDKFPHWLQTLPMLTVLVLRANKLYDPIDDLKTEHGFSSIIIFDISSNYFNGPIPKTYIQNFKAMKNVIQYEGDEIYMDTSPTLVKASPILVIEFIAMHIYESVTVTTKAISMTLNKIPINFVTIDLSQNKFEGQIPDVIGELHALRGLNFSHNRLSGLIPKSIGYLTNLESLDLSSNMFIGRIPTELTNLNSLEVLNLSNNLLVGEIPQGKQFATFSNDSYLGNSGLYGFPLSMNCNNTIQKSPFSPSLLGEERFGFGWESVVIGYGCGMIFGIGLGLLYYRKA* 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2824 908 Pfam Leucine rich repeat N-terminal domain 30 75 IPR013210 -
Pvu8g2824 908 PRINTS Leucine-rich repeat signature 470 483 - -
Pvu8g2824 908 PRINTS Leucine-rich repeat signature 814 827 - -
Pvu8g2824 908 Gene3D Ribonuclease Inhibitor 29 205 IPR032675 -
Pvu8g2824 908 SUPERFAMILY RNI-like 85 410 - -
Pvu8g2824 908 Pfam Leucine rich repeat 747 802 IPR001611 GO:0005515
Pvu8g2824 908 Pfam Leucine rich repeat 302 362 IPR001611 GO:0005515
Pvu8g2824 908 Pfam Leucine rich repeat 445 504 IPR001611 GO:0005515
Pvu8g2824 908 Pfam Leucine rich repeat 539 599 IPR001611 GO:0005515
Pvu8g2824 908 Pfam Leucine Rich Repeat 256 277 IPR001611 GO:0005515
Pvu8g2824 908 ProSiteProfiles Leucine-rich repeat profile. 232 253 IPR001611 GO:0005515
Pvu8g2824 908 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 12 365 - -
Pvu8g2824 908 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 362 894 - -
Pvu8g2824 908 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 304 392 - -
Pvu8g2824 908 Gene3D Ribonuclease Inhibitor 717 863 IPR032675 -
Pvu8g2824 908 Gene3D Ribonuclease Inhibitor 395 711 IPR032675 -
Pvu8g2824 908 Gene3D Ribonuclease Inhibitor 206 321 IPR032675 -
Pvu8g2824 908 SUPERFAMILY RNI-like 342 694 - -
Pvu8g2824 908 Gene3D Ribonuclease Inhibitor 323 394 IPR032675 -
Pvu8g2824 908 SMART LRR_sd22_2 230 251 - -
Pvu8g2824 908 SMART LRR_sd22_2 301 327 - -
Pvu8g2824 908 SMART LRR_sd22_2 419 437 - -
Pvu8g2824 908 SMART LRR_sd22_2 514 540 - -
Pvu8g2824 908 SMART LRR_sd22_2 586 612 - -
Pvu8g2824 908 SMART LRR_sd22_2 790 816 - -
Pvu8g2824 908 SMART LRR_sd22_2 253 279 - -
Pvu8g2824 908 SUPERFAMILY L domain-like 742 841 - -
Pvu8g2824 908 SMART LRR_typ_2 130 155 IPR003591 -
Pvu8g2824 908 SMART LRR_typ_2 538 561 IPR003591 -
Pvu8g2824 908 SMART LRR_typ_2 373 396 IPR003591 -
Pvu8g2824 908 SMART LRR_typ_2 562 585 IPR003591 -
Pvu8g2824 908 SMART LRR_typ_2 790 813 IPR003591 -
Pvu8g2824 908 SMART LRR_typ_2 105 129 IPR003591 -
Pvu8g2824 908 SMART LRR_typ_2 230 253 IPR003591 -
Pvu8g2824 908 SMART LRR_typ_2 419 443 IPR003591 -
Pvu8g2824 908 SMART LRR_typ_2 301 324 IPR003591 -
Pvu8g2824 908 SMART LRR_typ_2 814 842 IPR003591 -
Pvu8g2824 908 SMART LRR_typ_2 766 789 IPR003591 -
Pvu8g2824 908 SMART LRR_typ_2 491 514 IPR003591 -
Pvu8g2824 908 SMART LRR_typ_2 325 349 IPR003591 -
Pvu8g2824 908 ProSiteProfiles Leucine-rich repeat profile. 540 561 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2824 Pvu-Chr8 58293939 58296691 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2824 8 903 Receptor kinase-like Gene Family AT1G47890 34.091 3.77e-131 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2824 - - var:108336514 1015.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2824 8 58293939 58296691 Pvu8g2824 8 58293939 58296691 ECH