Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2823 ATGTCTAAATTCGAAGGTGTTATTGTCTCCGATCAATCGCTTCAAAGCCAATTCACGCAGGTTGAGCTTCGCAGCATGAAATCAAAATTTGTCAATCTAAAGAATCAAAATGGTAAAGTTACATTTGGAGATTTGCCAGCTTTGATGGTGAAGCTAAACGCGTTCAGAGACATGTATAACGAGGATGAGATTAGGGGGATATTGGGTGAACCAGGCACTGATTTTACCAATGCCATTGATTTTGAGATCTTCTTAAAGGCATATTTGAATTTGCAAAGCCAACCTACTGCAAAACAAGGTGGTAGGAGGCACTCCTCGTCATTTCTCAAGGAAACTGTGACCACCCTTCTCCACACAATCAGTGAATCAGAAAAGGCCTGTTATGTTGCCCACATAAACAGCTATCTTGGTGATGATCCATTTTTGAAGCAATATCTTCCATTGAACCCAGCTTCAAATGATATATTTGATCTTGCAAAAGATGGCGTTCTTTTGTGTAAGCTCATCAATGTTGCTGTGCCTGGGACTATAGATGAGCGAGCCATCAATTGCAAACGCAATCCCAGTCTTTGGGAGGTCAACGAGAACCATACTCTATGCCTCAATTCCGCCAAGGCTATTGGCTGCACAGTGGTTAACATTGGTGCACAGGATTTGGTTGAAGGAAGACCTTATCTTGTTGTAGGTTTGATTTCCCAAATTATAAAGATTCAGCTGCTGGCAGATCTCAACCTTAAGAAGACACCTCAACTTATGGAATTGGTTGATGACAGTGAGGAGATCGAAGAGCTTCTTAGTTTGTCTCCCGAAAAGGTTCTTCTAAAATGGATGAATTTTCATCTCCAGAGAGCAGGATACGAGAAAACTGTCAGAAATTTTTCTTCTGATGTAAAGGATGGAGAGGCTTATGCTTATCTTCTGAATGTCCTTGCTCCTGAACATTGCAGTCCAGCCACCTTAGATACCAAGGATTCCACTGAAAGGGCAAATCTGGTTATTGATCATGCAGAGAGAATGGGCTGCAAAAGATACTTGACCCCAAGGGATGTTGCCGAGGGTACTTCGAATTTGAATCTCGCATTTGTTGCACAACTGTTTCATCACAGGAGTGGTCTATCTACAGACACTAAAAAGATTTCCTATGCTGAGATGATAACAGATGATGTCCAAACATCTAGAGAAGAGAGATGCTTCCGAATGTGGATCAATAGTCTTGGAATTTCTACACATGTAAATAATCTATTTGAGGATGTCAGAAATGGATGGGTACTTTTAGAGGTGTTAGACAAGATTTTTCCTGGATCTATTAACTGGAAACGGGCAACAAAACCTCCAATTAGAATGCCATTCAGAAAAGTAGAGAACTGCAATCAGGTCATAGAAGTTGGTACACAACTGAGATTCTCACTGGTCAATGTAGCTGGCAATGACATTGTGCAAGGAAATAAGAAGCTCATTCTTGCTTTGTTGTGGCAGCTGATGAGGTTCACTATGCTTCAACTGTTGAGAAATTTGAGATCTCATTCCCAAGGAAAGGAGATCAAGGATGCCGATATCCTGCATTGGGCAAACAGAAAAGTGAAGAACTCTGGCAGAACTTCTCACATAGAGAGCTTCAAGGACAAGAGCTTGTCAAATGGACTCTTTTTCCTTGAGCTTCTGAGTGCTGTTGAGCCCCGAGTTGTCAATTGGAACCTTGTCACCAAGGGTGGAAGTGATGATGAGAAGAGGTTGAATGCCACCTATACAATCAGTGTTGCAAGAAAGCTTGGTTGTTCCATTTTTTTGTTACCTGAGGATATTATGGAGGTTAACCAGAAGATGATTCTCACTCTTACAGCTAGTATAATGTATTGGAGCCTGCAGCAGCAGACTGAAGATCCTGATTCATTTCCTTCACCTGCCAACACTACCACCTCCACACCTGAAGCATCCCCAGCACCTTCTGTTTGTGGTGAAGATGAAAGTTCGTCCATCGGCGGCGAATTCTCCAACTTGAGTGTCGACGATACCACCTCCGACAGCACGGCCTCTTCACAACCAGAGTGTGATGGTGTTTCTGCAGCAGATGAGCTTTTATGA 2082 0.4241 MSKFEGVIVSDQSLQSQFTQVELRSMKSKFVNLKNQNGKVTFGDLPALMVKLNAFRDMYNEDEIRGILGEPGTDFTNAIDFEIFLKAYLNLQSQPTAKQGGRRHSSSFLKETVTTLLHTISESEKACYVAHINSYLGDDPFLKQYLPLNPASNDIFDLAKDGVLLCKLINVAVPGTIDERAINCKRNPSLWEVNENHTLCLNSAKAIGCTVVNIGAQDLVEGRPYLVVGLISQIIKIQLLADLNLKKTPQLMELVDDSEEIEELLSLSPEKVLLKWMNFHLQRAGYEKTVRNFSSDVKDGEAYAYLLNVLAPEHCSPATLDTKDSTERANLVIDHAERMGCKRYLTPRDVAEGTSNLNLAFVAQLFHHRSGLSTDTKKISYAEMITDDVQTSREERCFRMWINSLGISTHVNNLFEDVRNGWVLLEVLDKIFPGSINWKRATKPPIRMPFRKVENCNQVIEVGTQLRFSLVNVAGNDIVQGNKKLILALLWQLMRFTMLQLLRNLRSHSQGKEIKDADILHWANRKVKNSGRTSHIESFKDKSLSNGLFFLELLSAVEPRVVNWNLVTKGGSDDEKRLNATYTISVARKLGCSIFLLPEDIMEVNQKMILTLTASIMYWSLQQQTEDPDSFPSPANTTTSTPEASPAPSVCGEDESSSIGGEFSNLSVDDTTSDSTASSQPECDGVSAADELL* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2823 693 ProSiteProfiles Calponin homology (CH) domain profile. 122 239 IPR001715 GO:0005515
Pvu8g2823 693 Gene3D - 245 373 IPR036872 -
Pvu8g2823 693 MobiDBLite consensus disorder prediction 658 683 - -
Pvu8g2823 693 SMART ch_5 394 496 IPR001715 GO:0005515
Pvu8g2823 693 SMART ch_5 269 368 IPR001715 GO:0005515
Pvu8g2823 693 SMART ch_5 515 619 IPR001715 GO:0005515
Pvu8g2823 693 SMART ch_5 124 237 IPR001715 GO:0005515
Pvu8g2823 693 PANTHER FIMBRIN/PLASTIN 3 680 IPR039959 GO:0051015|GO:0051017
Pvu8g2823 693 Gene3D - 113 243 IPR036872 -
Pvu8g2823 693 SUPERFAMILY Calponin-homology domain, CH-domain 120 618 IPR036872 -
Pvu8g2823 693 MobiDBLite consensus disorder prediction 625 693 - -
Pvu8g2823 693 ProSitePatterns Actinin-type actin-binding domain signature 2. 470 494 IPR001589 -
Pvu8g2823 693 ProSiteProfiles Calponin homology (CH) domain profile. 392 498 IPR001715 GO:0005515
Pvu8g2823 693 ProSiteProfiles Calponin homology (CH) domain profile. 513 621 IPR001715 GO:0005515
Pvu8g2823 693 CDD CH 268 368 IPR001715 GO:0005515
Pvu8g2823 693 Gene3D - 388 505 IPR036872 -
Pvu8g2823 693 MobiDBLite consensus disorder prediction 625 646 - -
Pvu8g2823 693 CDD CH 401 495 IPR001715 GO:0005515
Pvu8g2823 693 Gene3D - 506 618 IPR036872 -
Pvu8g2823 693 CDD CH 516 621 IPR001715 GO:0005515
Pvu8g2823 693 PANTHER FIMBRIN-1 3 680 - -
Pvu8g2823 693 SUPERFAMILY EF-hand 13 95 IPR011992 -
Pvu8g2823 693 Pfam Calponin homology (CH) domain 268 369 IPR001715 GO:0005515
Pvu8g2823 693 Pfam Calponin homology (CH) domain 395 496 IPR001715 GO:0005515
Pvu8g2823 693 Pfam Calponin homology (CH) domain 516 617 IPR001715 GO:0005515
Pvu8g2823 693 Pfam Calponin homology (CH) domain 153 237 IPR001715 GO:0005515
Pvu8g2823 693 ProSiteProfiles Calponin homology (CH) domain profile. 267 370 IPR001715 GO:0005515
Pvu8g2823 693 CDD CH 142 237 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2823 Pvu-Chr8 58283629 58289795 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2823 1 685 EF-hand Containing Proteins AT5G55400 67.286 0.0 971
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2823 K17275 - gmx:100794850 1252.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2823 8 58283629 58289795 Pvu8g2823 8 58283629 58289795 ECH