Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2822 ATGAAGAGGGGTAGGTCGCATTCAGATGATGAAGATGAGTGTGAGTCTGAGGTTCAGTTAATCTCTGTGTCAAATTACCATCTTGTTGACGATGAGGACAATCCTGTGTCTTTTGCTGTGTTGCCAATTCAATGGGATGATTCTGAGAACTGTGGTGGTTGCGAAGAGAAGGTGTTTCTGGACGGGGATGCCGATAGCGGGCTGTTGAAGATTTTCATGCAAGTGACGGCGTGGAGATTTGATCTTTCCAAAGCGAGACCCGAGGTGTTCTTGCTGGCAAAGGATGGAAGGTGGATCAAGATTGAGAAGCCTAGGAAGGGTTTTCAGGAAAACGTAAGGACTGTTTTGATCACCCTTCATTTCCTCCATAGTTTGAAGGGAGGACATCAAATGTCTGTGGGATCTCTCTGGCAAGACTTGAGCAAGGATAGGGAGTTGAGTTGTGATGGCGTGTGCATGAGATCATTTCATGCTACAAAGGAGGCTGGTAGAGAAAATAGTTGTTCTTCTCTTGGTTTTACCAAGAAGGAAGTTGATGAGATCCAGAACTTTTATTGTAAGAATTGTGAATGTCATCAGCACCAATGTTTTGCATGTGGCAAGCTGGGGTCTTCTGATAAAGTTATTGGTGCAGAGGTTTTTAAATGTGCTTCTGGAACCTGTGACCGTTTTTATCATCCACATTGTGTTGCAAAATTACTTCCCGATGTAGTCAAGCAAGTCACAAAGGAATTTGAGAGCAATATTGCTGATGGGAATCCTTTTACTTGCCCCCTTCATTATTGTTGTGTCTGTAAAGGATTGGAAAATATGATGGATCCTGAGTTGCAGTTTGCTGTTTGTAGGCGTTGTCCAAAGGCATATCATCGTAAATGTTTGCCAAGAGAATTTACTGCTGACAAAAGTGATATACTAAGGGCTTGGGAAGGTCTTCTACCAAAGAACCGCATTCTTATATATTGCTTAAATCATGAAATTGATCCTAAACTTGGGACTCCTGTAAGAGGTCATATAAAATTCCCCAAAATGAAAGCTACTGCTCAAAAAATTGATAGTACTATTGAGCAGAAAAAGCCTTCAACTAAAAAGAGGGTTATGTTGAAGAAAAATATTGACTCAGATAGCTCAGCTGGCAAAAGCACTTCAAAAGGATCTAAATTGACTGCGAAGAAGCCATCTAATAAGAAGATTTCCAGTTCAAATATGTCAAAAAAGCCAAAATCAAAAGAAACATCAAGGTGTTTGACTGAAAATAAGATGTCAATCTTGAAGAAATTTGAAATTCCTGACACTGAGCAAAAATATAACCAGCAAACAGAGAATGAGGGTTTGGAGCAAATTGAGCGTGACAATCAGATAAATAAGTTGAATACTATGCCTATTGGAAAGTTGAGTATTGATTTGCCTCCACTGGATGCTGATTCGGAAAAGAGTTTGTTGGATTTATTTAAAGAAGCCAGTTCATCCATTACGTTGGAGAATGTCTTAGAAAAGCACACATTTGCTTCTACTCATAGTCAATCGATGAGAAGTGTTGTGGAGAAGACCATTACAACGGAGAAATTGGAAGATTCAGTCAATTCCGTTCGAACAGCTATAAGGATGCTCGAGAGTGGGTGCAGCATTCAGGACGCGGAAGCTGTTTGTGATCCTGATGTTCTGAAACACATATTTAAGTGGAAGATCGCATATAAACTTCAGTGGTTTGCTCAGAATGGTGATACGATTGTGGACTTGAGCTGTGGTGCTAATGATTTTAGCATCCTTATGAAGAAAAGGCTTGAGGAGGCTGGGAAGAAATGTTCGTACAGAAAATATGATTTACTTCCAACAAAGAATGAATTTAGTTCTGAAAGGAGTGATTGGATGACTGTACAACAAACCGAGTTACCCTCAGGGTCACAGTTGATCATTGGTCTCACCCCTCCTCCCCTTGGTCATAAAGCATTGGCTAACAAGTTTATAGACAAGGCTCTTGAGTTTAAACCAAAGCTCCTAATTCTTATAGTAGACCCAGAGATAGAGAGGCTCAATAAAAAACTATCCCTGTATGATCTTATATGGGAGGATGAGAATTTTCCATCAGACACGTCAATTTATGTACCTGGATCAGTTCATGCAAATGACAGACAAATAGATAAAAAGAATGTAAGGCCTCCCAGACTCTCCCTTTGGAGCCGCTCTGACTGGACTACGAAACACAGAGTCATAGCCCAAGACTATGATCATGTGTGCAACGAGCATGACACATTGGCTGCTGCTGTTCATGCTACCTCTGGAACTTATGCTGACAATTCAAAGTTAACTCATGACGAAGAAGATCAGGCATCTGTAAGTGGTAATGTTCAGAAAAGAAGCTTAAGTTACAATGTTGACGAATGTTGGAAGGGCATGCCTGGGAAGTCACGAAGGAAGAGAAAACATATTGAAGAAAATATCTCAGCGGTAGCTGTGATCCCACCAGCCAAAAGGCATGCTGTAAATAAAATATGTAATGGAGTAGCTGACGACACTCAACCCATTCCACTGAATACAAGTTCTTTGGGTTCTGAACCTCGTACATTCAGTAAAAGCGTCAGTTTTGGATATGGTGGTGGATTGCATGGTTTTGCTGCTGCTCCTAACTATGAATATGCAAGCAAACATTCGTGTGGTTGGCTCGAAGAGTAG 2670 0.4079 MKRGRSHSDDEDECESEVQLISVSNYHLVDDEDNPVSFAVLPIQWDDSENCGGCEEKVFLDGDADSGLLKIFMQVTAWRFDLSKARPEVFLLAKDGRWIKIEKPRKGFQENVRTVLITLHFLHSLKGGHQMSVGSLWQDLSKDRELSCDGVCMRSFHATKEAGRENSCSSLGFTKKEVDEIQNFYCKNCECHQHQCFACGKLGSSDKVIGAEVFKCASGTCDRFYHPHCVAKLLPDVVKQVTKEFESNIADGNPFTCPLHYCCVCKGLENMMDPELQFAVCRRCPKAYHRKCLPREFTADKSDILRAWEGLLPKNRILIYCLNHEIDPKLGTPVRGHIKFPKMKATAQKIDSTIEQKKPSTKKRVMLKKNIDSDSSAGKSTSKGSKLTAKKPSNKKISSSNMSKKPKSKETSRCLTENKMSILKKFEIPDTEQKYNQQTENEGLEQIERDNQINKLNTMPIGKLSIDLPPLDADSEKSLLDLFKEASSSITLENVLEKHTFASTHSQSMRSVVEKTITTEKLEDSVNSVRTAIRMLESGCSIQDAEAVCDPDVLKHIFKWKIAYKLQWFAQNGDTIVDLSCGANDFSILMKKRLEEAGKKCSYRKYDLLPTKNEFSSERSDWMTVQQTELPSGSQLIIGLTPPPLGHKALANKFIDKALEFKPKLLILIVDPEIERLNKKLSLYDLIWEDENFPSDTSIYVPGSVHANDRQIDKKNVRPPRLSLWSRSDWTTKHRVIAQDYDHVCNEHDTLAAAVHATSGTYADNSKLTHDEEDQASVSGNVQKRSLSYNVDECWKGMPGKSRRKRKHIEENISAVAVIPPAKRHAVNKICNGVADDTQPIPLNTSSLGSEPRTFSKSVSFGYGGGLHGFAAAPNYEYASKHSCGWLEE* 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2822 889 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 192 283 IPR013083 -
Pvu8g2822 889 MobiDBLite consensus disorder prediction 355 370 - -
Pvu8g2822 889 SMART PHD_3 195 261 IPR001965 -
Pvu8g2822 889 SMART PHD_3 262 325 IPR001965 -
Pvu8g2822 889 CDD PHD2_NSD 195 260 - -
Pvu8g2822 889 MobiDBLite consensus disorder prediction 346 416 - -
Pvu8g2822 889 MobiDBLite consensus disorder prediction 373 405 - -
Pvu8g2822 889 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 146 562 - -
Pvu8g2822 889 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 14 145 - -
Pvu8g2822 889 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 562 831 - -
Pvu8g2822 889 PANTHER ENHANCED DOWNY MILDEW PROTEIN 146 562 - -
Pvu8g2822 889 PANTHER ENHANCED DOWNY MILDEW PROTEIN 14 145 - -
Pvu8g2822 889 PANTHER ENHANCED DOWNY MILDEW PROTEIN 562 831 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2822 Pvu-Chr8 58273190 58281679 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2822 - - pvu:PHAVU_008G273400g 1462.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2822 8 58273190 58281679 Pvu8g2822 8 58273190 58281679 ECH
Pvu6g0519 6 16436184 16438137 Pvu8g2822 8 58273190 58281679 PCT