Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2802 ATGTTTTTCCACAAGGTTTTGTCCCGTGTGTCCACCACCATTTCCCGGACCTCTTTTCTCTCTGCTTCGCAAAGGCCCCAACACTTCTCCAATCACTTGCATTCCCTTATTCACCAATCCCCCAGCAAGTTGATTCCTGTTCAAGTCAATTTGTTACCGCTACGGATAAATTCATTATCAACTCCACGATTTGGGTTTTCTTCATCAGCTTCAAGTGAAACTAATGACAAGGAAAAAGGGAAGAATATAGATATTGGAGATTCTACAAATGATAACCCTGATAAAGAAAACAAAGAGGCCAAGAATTTTGAACAGGCCGGAGAAGCTAAATCCGCAGATAAAACAGAGGAATCAAGTTCTATTCGGGATTCTCAATCTCAAACTGTAAAAGGAAGGAGGAGAGGTTTTAAACGAACAACATTTTCTGATTCAGATTCAGATTCAGACTCAGACTCAGACTCAGACTCAGACTCAGACTCAGAGAGTGAATGTGATCTATCCAAGGATGATTTAATTAAACTTGTGGCTGAGAAAGAAGCACTTTTGAAGTTAAAGCACAAGGAGATTGAACAAATGCAGGATAAAGTTTTGCGTACTTATGCAGAAATGGAGAATATCATGGAAAGGACAAGACGTGAAGCAGATAATTCGAAAAAGTTCGCTATACAGAATTTTGCAAAGAGTTTACTAGATGTTGCGGACAATTTGGAAAGAGCTTCCTCAGTTGTCAAGGAAAGTTTTTCAAAAATTGATACACCTAATGACTCTGCTGAAGCGGTAAAACTTCTGAAAACACTTCTGCAAGGCGTTGAAATGACCGAGAAACAATTGTCAGAGGTACTTAAAAAGTTTGGTATAGAAAAATTTGATCCTACGAATGAGCCCTTTGATCCACACAGGCATAATGCCGTCTTCCAAATCCCTGATGGTTCTAAGCCTCCAGGAACCATTGCAGCTGTTCTGAAGGCAGGATATATGCTTTATGATCGTGTTATTCGCCCTGCGGAAGTTGGTGTGACGCAAGCAGTGGAGAATGAAGAGAATAATGGAAAAGATAGTATCTCTGATAAGGGTTCATAG 1080 0.4 MFFHKVLSRVSTTISRTSFLSASQRPQHFSNHLHSLIHQSPSKLIPVQVNLLPLRINSLSTPRFGFSSSASSETNDKEKGKNIDIGDSTNDNPDKENKEAKNFEQAGEAKSADKTEESSSIRDSQSQTVKGRRRGFKRTTFSDSDSDSDSDSDSDSDSDSESECDLSKDDLIKLVAEKEALLKLKHKEIEQMQDKVLRTYAEMENIMERTRREADNSKKFAIQNFAKSLLDVADNLERASSVVKESFSKIDTPNDSAEAVKLLKTLLQGVEMTEKQLSEVLKKFGIEKFDPTNEPFDPHRHNAVFQIPDGSKPPGTIAAVLKAGYMLYDRVIRPAEVGVTQAVENEENNGKDSISDKGS* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2802 359 Gene3D - 159 284 IPR013805 -
Pvu8g2802 359 PRINTS GrpE protein signature 197 213 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Pvu8g2802 359 PRINTS GrpE protein signature 293 308 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Pvu8g2802 359 PRINTS GrpE protein signature 320 339 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Pvu8g2802 359 PANTHER GRPE PROTEIN HOMOLOG 22 102 - -
Pvu8g2802 359 PANTHER GRPE PROTEIN HOMOLOG 138 343 - -
Pvu8g2802 359 Gene3D Head domain of nucleotide exchange factor GrpE 285 341 IPR009012 GO:0006457
Pvu8g2802 359 CDD GrpE 190 339 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Pvu8g2802 359 MobiDBLite consensus disorder prediction 146 164 - -
Pvu8g2802 359 SUPERFAMILY Head domain of nucleotide exchange factor GrpE 286 341 IPR009012 GO:0006457
Pvu8g2802 359 MobiDBLite consensus disorder prediction 63 166 - -
Pvu8g2802 359 ProSitePatterns grpE protein signature. 296 339 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Pvu8g2802 359 Hamap Protein GrpE [grpE]. 142 341 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Pvu8g2802 359 SUPERFAMILY Coiled-coil domain of nucleotide exchange factor GrpE 177 285 IPR013805 -
Pvu8g2802 359 PANTHER GRPE PROTEIN 138 343 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Pvu8g2802 359 PANTHER GRPE PROTEIN 22 102 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Pvu8g2802 359 Coils Coil 175 209 - -
Pvu8g2802 359 Pfam GrpE 177 340 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Pvu8g2802 359 MobiDBLite consensus disorder prediction 74 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2802 Pvu-Chr8 58113412 58117849 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2802 K03687 - gmx:100803396 469.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2802 8 58113412 58117849 Pvu8g2802 8 58113412 58117849 ECH