Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2798 ATGGCTCCTCTCGCATTCTCCTTCTTCTTCCTTCTTATCTCCTTCTTTTCTTCATCATCAGAAGCGGGGTCTGTAGGAATAAACTATGGAAGGATTGCGAACGACCTACCTACACCGGCCAAGGTGGTGGAGCTTCTGAAGAGTCAGGGGCTGAGCCGTGTGAAGCTGTACGACACCGACGCCACGGTTTTAAGCGCGTTTGCGAACTCAGGAATCAAGGTGGTGGTTGCCATGCCGAACGAGCTTCTCTCGAACGCCGCCGCGGACCAGTCCTTCACCGACGCATGGGTGAAAGATAACATCGCCAGCCACTACCCCGCCACGCAAATCGAAGCCATCGCCGTGGGCAACGAAGTGTTCGTGGACCCCAACAACACCACGAAGTTCCTCGTGGCGGCGATGAAGAACGTGCACGCTTCGTTAACCAAGTCCAGCCTCGACACCAACATCAAAATCTCTTCTCCCATCGCTCTCTCCGCGCTTCAATCCTCCTTCCCCGCCTCATCCGGTTCATTCAAAACCGAACTGGTCGAACCGGTTATTAAACCCATGCTCGACCTCCTCCGCCAAACCGGCTCCTACCTCATGGTTAACGCGTACCCGTTTTTCGCTTACTCTGCCAACGCCGACAAAATCTCCCTGGAGTACGCGCTCTTCAAGGAGAACGCCGGCGTGGTTGATTCCGGTAACGGTTTGAAATACACCAACCTCTTCGACGCCCAAATCGACGCCGTTTTCGCTGCCATGTCAGCGCTTCAATACACCGACGTTAAGATTACGGTTTCCGAAACGGGCTGGCCTTCCGCCGGAGACTCGAATGAAATCGGAGCGGGCCCAGAGAATGCCGCGGAGTATAACGGGAACTTGGTGCGGCGCGTGTTGGGCCAGAGTGGGACCCCGTTGAGGCCCAATGACTCACTCGACGTTTTTCTCTTCGCTCTTTTCAACGAGAATCAGAAAACAGGGCCCACTTCGGAGAGGAACTACGGGCTGTTTTACCCCAGCGAGAAGAAGGTTTACGATATTCCGCTGAAGGCGGAGGGGGTTACGGAGGCGCCGTCGTCGGGGGTGGAGAAGAGCCAGGTTCCGGCGAGCGGGGAGGTGTCGACGACGTCGCGTGACGGTCAGACATGGTGCGTGGCGAATGGCGGCGCTTCCGAGGAGAAGCTTCAGAACGGTCTTAACTACGCCTGCGGAGAGGGTGGCGCTGATTGCAGCGCCATTCAACCAGACGCCACGTGTTACAATCCCAACACTTTGGAGGCGCATGCTTCTTACGCTTTCAACAGTTACTATCAGAAGAAGGCACGTGCCGCTGGCACCTGCGATTTTGGTGGAACCGCTTATGTTGTCACCCACCCTCCTAAGTATGGTAGCTGCGAATTTCCCAGTGGATACTGA 1401 0.5589 MAPLAFSFFFLLISFFSSSSEAGSVGINYGRIANDLPTPAKVVELLKSQGLSRVKLYDTDATVLSAFANSGIKVVVAMPNELLSNAAADQSFTDAWVKDNIASHYPATQIEAIAVGNEVFVDPNNTTKFLVAAMKNVHASLTKSSLDTNIKISSPIALSALQSSFPASSGSFKTELVEPVIKPMLDLLRQTGSYLMVNAYPFFAYSANADKISLEYALFKENAGVVDSGNGLKYTNLFDAQIDAVFAAMSALQYTDVKITVSETGWPSAGDSNEIGAGPENAAEYNGNLVRRVLGQSGTPLRPNDSLDVFLFALFNENQKTGPTSERNYGLFYPSEKKVYDIPLKAEGVTEAPSSGVEKSQVPASGEVSTTSRDGQTWCVANGGASEEKLQNGLNYACGEGGADCSAIQPDATCYNPNTLEAHASYAFNSYYQKKARAAGTCDFGGTAYVVTHPPKYGSCEFPSGY* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2798 466 Pfam Glycosyl hydrolases family 17 25 342 IPR000490 GO:0004553|GO:0005975
Pvu8g2798 466 Gene3D Glycosidases 23 350 - -
Pvu8g2798 466 PANTHER O-GLYCOSYL HYDROLASES FAMILY 17 PROTEIN 6 459 - -
Pvu8g2798 466 SUPERFAMILY (Trans)glycosidases 25 342 IPR017853 -
Pvu8g2798 466 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 6 459 IPR044965 GO:0004553|GO:0005975
Pvu8g2798 466 SMART X8_cls 377 462 IPR012946 -
Pvu8g2798 466 MobiDBLite consensus disorder prediction 351 370 - -
Pvu8g2798 466 Pfam X8 domain 377 448 IPR012946 -
Pvu8g2798 466 MobiDBLite consensus disorder prediction 354 370 - -
Pvu8g2798 466 Gene3D - 371 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2798 Pvu-Chr8 58079870 58082321 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2798 20 455 Glycoside Hydrolase AT5G55180 70.872 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2798 - - gmx:100803406 804.283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2798 8 58079870 58082321 Pvu8g2798 8 58079870 58082321 ECH