Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2797 ATGAAGAAAGACATGGTTAACATACGGTACCTGGTACCATGTCTTGCTTTACTCTCTCTCACACTAATCTTCCTCCCTTTATGTCACTCCTTCAACTATGGCCATGCCCTGTCCCAGAGCCTACTCTACTTCGAGTCACAGCGTTCAGGACGCTTACCCTACAACCAAAGGGTCACTTGGCGTCACCATTCTGCCCTCACTGATGGCCTAGAACAAGGGGTGGACTTGGTGGGAGGGTACTATGATGCAGGGGACAATGTCAAATTTGGTTTGCCAATGGCATTCACCGTAACACTCCTCTCATGGGCTGCCATAGAATACGGCCAACAAATCGCGGCTGCCGGCGAGTACGCTCACACGCTCGAGGCCATCAAGTGGGGAACTGATTATTTCATCAAGGCTCACACAGAACCTAATGTTCTTTGGGTTCAGGTGGGTGACGGCTACACTGATCACTACTGTTGGCAGCGGCCGGAGGACATGACGACATCACGGCGAGCATACAAGGTTGACGCCGAGAACCCTGGTTCGGATGTGGCCGGTGAGACCGCGGCAGCATTGGCGGCGGCATCCATGTTGTTTAGGAGAACAAACCCACATTATTCTCAACTACTTTTGCATCATGCAGAACAGTTGTTTGAGTTTGGTGACAAGTACAAGGGGAAATATGATGAGAGTGTTGGAGTGGCTAAAGGCTATTATGCTTCGGTTAGTGGCTACATGGATGAGCTGCTATGGGCAGCTATTTGGCTATATAAGGCCACCCAAAAAGATCAATATTTAAACTATTTTGTGGACAAGGCTCATGACTTTGGTGGGACCACTTGGGCCATCAATGAATTCAGCTGGGATGTTAAATATGCTGGCCTTCAGGCCATTGCTTCCATGTTACCAATGGAAGAAAAAAATCACAAGAAACATGAAGTGATACTAAAAGAGTATGGTTCAAAAGCCGATCACTATCTGTGCGCGTGCCTCAACCTCAACAACGTGAGTAACGTGGAGCGGACCCCAGGAGGGTTACTGTACACCCGCGAATGGAACAACATGCAATACGTAGCAACGGCGTCGTTCCTTCTCACACTCTATTCTGATCACCTGCAAGCCACCCACCAGAAGCTGCAATGCCACAGAGGGGAGGTGGGCCCACACCAGATGTTCGCCTTTGCAAAATCACAGGTTGATTACATCTTGGGTTCTAATCCAATGGCTATGAGTTACTTGGTAGGTTACGGTCCCAATTTCCCCAAGAGGGTGCACCATAGAGGTGCATCCATTGAATCATCGAAGGAAAACAAGGGTTTTATTGGGTGCGTTCAGGGTTATGATACCTGGTATGGACGCGTTCAACCCAATCCGAATGTACTAATTGGGGCCCTCGTTGGTGGGCCTGATAGAAAAGACCAATTTAAAGACGAGAGACAAAATTACATCCAAACAGAGCCTTGTACCTACAACACTGCAGCTTTAGTAGGGGTTTTTGCTAGATTGCATCAATCACATGGTCATATTTATCACACTGAAACCCCTTTGATAGCTTCTACCTAA 1548 0.48 MKKDMVNIRYLVPCLALLSLTLIFLPLCHSFNYGHALSQSLLYFESQRSGRLPYNQRVTWRHHSALTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTVTLLSWAAIEYGQQIAAAGEYAHTLEAIKWGTDYFIKAHTEPNVLWVQVGDGYTDHYCWQRPEDMTTSRRAYKVDAENPGSDVAGETAAALAAASMLFRRTNPHYSQLLLHHAEQLFEFGDKYKGKYDESVGVAKGYYASVSGYMDELLWAAIWLYKATQKDQYLNYFVDKAHDFGGTTWAINEFSWDVKYAGLQAIASMLPMEEKNHKKHEVILKEYGSKADHYLCACLNLNNVSNVERTPGGLLYTREWNNMQYVATASFLLTLYSDHLQATHQKLQCHRGEVGPHQMFAFAKSQVDYILGSNPMAMSYLVGYGPNFPKRVHHRGASIESSKENKGFIGCVQGYDTWYGRVQPNPNVLIGALVGGPDRKDQFKDERQNYIQTEPCTYNTAALVGVFARLHQSHGHIYHTETPLIAST* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2797 515 PANTHER ENDOGLUCANASE 13 504 - -
Pvu8g2797 515 SUPERFAMILY Six-hairpin glycosidases 30 502 IPR008928 GO:0005975
Pvu8g2797 515 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 396 422 IPR018221 -
Pvu8g2797 515 Pfam Glycosyl hydrolase family 9 33 493 IPR001701 GO:0004553|GO:0005975
Pvu8g2797 515 PANTHER ENDO-1,4-BETA-GLUCANASE 13 504 - -
Pvu8g2797 515 Gene3D - 29 501 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2797 Pvu-Chr8 58067579 58070457 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2797 31 496 Glycoside Hydrolase AT2G32990 74.304 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2797 - - gmx:100786912 921.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2797 8 58067579 58070457 Pvu8g2797 8 58067579 58070457 ECH