Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2777 ATGGAGGACATGGACGAGATCGATGCCGTTCCTCAGGTTTACATGGCTTGCATACTAAATGGTCATAGAATAGGAGTTTCTTATTATGATTCCACCCTTCGCCAACTTTATGTACTTGAAGTTTGGGATGATGGTGACAAAGGTTTTCCAATTATTGATCTGGTGAAATATCAAGCAAACCCTTTGGTTATTTACACAAGCACTAAAAGTGAAGAATCCTTCTTGTCTGATCTGCAACAAAAGGATGGAGTAGCTGAGTCTCCTACAGTAAAGCTTGTTAAAAGTTCTATATTCAGCTACGAGCAAGCATGGCATAGATTAATTTACCTGCGAGTGGCGGGGATGGATGATGGATTAAATGTGAAGGAGAGGATTTACTATCTGAGTTCCATGATGGACATGGGAAGTGAAGTACAGGTTCGTGCTAGTGGTGGCCTTCTTGCAATATTAGAGAATGAAAGGATTGTAGACACTCTTGAACAAAAAGAATCTGGAAATACATCAATCTCAATTCATTCTGTTGCAGAAATTTCACTAAATAACTTTCTCAAACTTGATGCAGCAGCTCATGAAGCATTACAAATATTCCAAATAGACAAGCACCCAAGCCACATGGGAATTGGTAGAGCCAAAGAAGGGTTTTCAGTATTTGGAATGATGAATAAGTGTGTGACTCCGATGGGTAGACGTCTTTTGAGAAATTGGTTCTTAAGGCCTATTCTTGATCTTGAAGTGCTAAACTACCGTTTAAATTGTATATCTTTTTTTCTACGTTCAGAAGAATTAGTTGCTTCATTACGGGAAACCTTGAAATCTGTAAAGGATATCCCCCACTTGCTGAAGAAATTTGACTCTCCAAGCTTTACGTGCGCTAGCTCTGATTGGACAGCTCTTCTGAAGAGTATTTGTGCGCTGTTGCATGTAAACAAGATTTTTGAAGTTGGAATTTCAGAAGGCCTTCGTGAAGAATTGAAGTATTTAAACTTGGATATTGTTGAGAAGGCTAGTTCATGCATAACAGCAGAACTTGGTTATGTCTATGAACTGGTAATTGGTGTTATTGATTTAAATAGAACTAAAGAGAAGGGATATGCGACGGTGGTGAAAGAAGGTTTCTGTGACGAGTTGGATGAGCTGAGGCAAATATATGAGGAAATGCCGGAATTTCTGGAAGAGGTTTCATCATTGGAATTGGCTGAACTTCCCGTTCTATGCAAAGACAAGCGTGTTCCGTGTATTGTTTATATACAGCAAATAGGTTATTTAATGTGTATCTTTGAAGAAAAACCTGAAGAAACCACTCTGGAGACACTTGTAGATTGGGAATACGCATTTTGTGACACAGATGGAGAGACAAAAAGATACTTTTATCGTACGCCGAAGACACGAGAATTGGATAGTCTGCTGGGAGATATTCACCATAAAATTCTAGATATGGAGAGGGCAATCACCAGAGATTTGTTTTCCCGTATATTGATGTTCCATACCCTTTTGATAAAGGTGGCAACTTTTGCAGCTGAGCTGGACTGCTTTTTGTCAATGGCATTGATTGCACGGCAGAACAACTACGTCAGGCCCTCGTTGACTGAAGAAAATTTGCTTGATATAAAAAATGGAAGGCATGTTTTGCAGGAAATGACGGTAGACACATTTATTCCTAATGACACTAATATTCTTCATGATGGAAGAATAAATATCATCACTGGTCCTAATTTTTCTGGAAAAAGTATCTATATAAAGCAGATTGCTATAATTGTTTTTCTCTCCCACATTGGTAGTTTTGTGCCAGCTGATGCAGCAACTGTGGGTCTAACAGATAGAATATTTTGTGCAACGGGAAGCAGGCTTATGACAGCTGAACAATCAACATTTATGATTGATCTACATCAAATAGGGATGATGCTCAGGCATGCTACTTCGCAATCTCTGTGTTTGGTGGATGAATTTGGTAAAGGCACTCTTACAGAAGATGGCGTTGGTCTACTTGCTGGAACCATAAATCACTTTGTCACGTGTCATGAACCTCCAAAGGTTTTTCTGTGCACTCATCTCATGGATTTATTGCATGGACAATCCTTGACCAAGTCTGAGCAGATTAAGTTTTACACAATGAGTATACTGAGGCCTGACGACAATTCCACATATATCGACGACATTGTATTTTTATACAGGCTTGTCCCTGGACATGCGCATCATAGCTACGGTGTACCTGAGGAAATCGTAAAAAGAGCAGCTGCTGTGTTGGATGCTGTTTCAAATAATAATCATGTCGAGCGGTTATGCAATGAGAACATCTCTGCCCAAGATCGTCAATACAAGGATGCCATGGATAAATTGTTGGAATTCGATATTGAAAAAGGCGACTTAAAACTTTTCTTTGAAGATATATTTTCTCTATCGTGA 2403 0.3916 MEDMDEIDAVPQVYMACILNGHRIGVSYYDSTLRQLYVLEVWDDGDKGFPIIDLVKYQANPLVIYTSTKSEESFLSDLQQKDGVAESPTVKLVKSSIFSYEQAWHRLIYLRVAGMDDGLNVKERIYYLSSMMDMGSEVQVRASGGLLAILENERIVDTLEQKESGNTSISIHSVAEISLNNFLKLDAAAHEALQIFQIDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLEVLNYRLNCISFFLRSEELVASLRETLKSVKDIPHLLKKFDSPSFTCASSDWTALLKSICALLHVNKIFEVGISEGLREELKYLNLDIVEKASSCITAELGYVYELVIGVIDLNRTKEKGYATVVKEGFCDELDELRQIYEEMPEFLEEVSSLELAELPVLCKDKRVPCIVYIQQIGYLMCIFEEKPEETTLETLVDWEYAFCDTDGETKRYFYRTPKTRELDSLLGDIHHKILDMERAITRDLFSRILMFHTLLIKVATFAAELDCFLSMALIARQNNYVRPSLTEENLLDIKNGRHVLQEMTVDTFIPNDTNILHDGRINIITGPNFSGKSIYIKQIAIIVFLSHIGSFVPADAATVGLTDRIFCATGSRLMTAEQSTFMIDLHQIGMMLRHATSQSLCLVDEFGKGTLTEDGVGLLAGTINHFVTCHEPPKVFLCTHLMDLLHGQSLTKSEQIKFYTMSILRPDDNSTYIDDIVFLYRLVPGHAHHSYGVPEEIVKRAAAVLDAVSNNNHVERLCNENISAQDRQYKDAMDKLLEFDIEKGDLKLFFEDIFSLS* 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2777 800 Gene3D - 183 410 - -
Pvu8g2777 800 Pfam MutS domain V 566 745 IPR000432 GO:0005524|GO:0006298|GO:0030983
Pvu8g2777 800 ProSitePatterns DNA mismatch repair proteins mutS family signature. 642 658 IPR000432 GO:0005524|GO:0006298|GO:0030983
Pvu8g2777 800 SMART mutATP5 562 749 IPR000432 GO:0005524|GO:0006298|GO:0030983
Pvu8g2777 800 SMART DNAend 211 547 IPR007696 GO:0005524|GO:0006298|GO:0030983
Pvu8g2777 800 CDD ABC_MSH5_euk 535 736 - -
Pvu8g2777 800 PANTHER MUTS PROTEIN HOMOLOG 5 21 785 - -
Pvu8g2777 800 PIRSF MSH2 1 789 IPR011184 GO:0005524|GO:0006298|GO:0030983
Pvu8g2777 800 SUPERFAMILY DNA repair protein MutS, domain III 186 522 IPR036187 -
Pvu8g2777 800 PANTHER DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER 21 785 IPR045076 GO:0005524|GO:0006298|GO:0030983|GO:0140664
Pvu8g2777 800 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 523 750 IPR027417 -
Pvu8g2777 800 Pfam MutS family domain IV 371 473 IPR007861 GO:0005524|GO:0006298|GO:0030983
Pvu8g2777 800 Gene3D - 523 787 IPR027417 -
Pvu8g2777 800 Pfam MutS domain III 190 515 IPR007696 GO:0005524|GO:0006298|GO:0030983
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2777 K08741 - gmx:100797567 1475.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2777 8 57929544 57943472 Pvu8g2777 8 57929544 57943472 ECH