Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2689 ATGAACAACTTGGAGTCCTACCCTCCCATTCTCCGCCACGTTAGCCACCCCCGCCACCACTCACCAGACGGCGGCGACGCCATCCACGAGGAGGAGCCGGATCCACTACCAGTGATAGATCTTGAATGCTTAACCCATGATGAGACGAAGACGAAGAAGGCCTTTGAAGAGGCTTGCAAGCATTGGGGGTTGTTCCGCTTGGTTAACCATGGAGTTCCGTCAACCCTATTCTCCCAACTTCAACACCAAGCCAAACAGCTCTTCTCTCTTTCCTTTGAGTCCAAACAAGCCTCGTGTAGTGGCTCCAACCCTGTGACTTACTTCTGGGGCACCCCTGCCCTTACTCCCTCTGGGACAGTCCTAACAACTGCCCCTCAAAACATCAATTGGGTTGAAGGTTTCAACATGCCTCTTCCTCACCTCTCCCAATTTCAATCTCAACTTCCTCAGCTTCACTCTTTCAGAGATTCGGTGGTGGAATATGGAGAACACATGAGCAGAATCGGTAGAAGATTATTCGAAGCTATGGCGAAGAACCTTGACCTGAACATTGAAGCATCATCAAGTTCTTCGTACGTAGCAGAAAACAGTGGAATCATGCGTATCTACCGTTATCCAAATTGCTCAAACTCTGACGTTGGTTTGGGCATGGAGGTGCACACAGATAGCTCTGTCGTGTCTATACTGAGCCAAGAAAATGAAGTGAGTGGACTTGAGCTCCTCAAAGATCATCAATGGCTCACTGTTAAACCCATTTCCAACACACTCATCGTCAACCTCGGAGACATGATGCAGGCAATAAGTGATGACAGATACAAAAGTGTGACACACAGAGTGAAGCTGAACAGTGAGAGAGAAAGAATCTCTATATGCTATTTTGTGTTCCCTGATGAAGACCTTCAGATTCAGAGTTCCAAGTACAAACCCTTCTCTTACAAACAATTTAGGGCAAAAGTGCAACAAGACGTCAAAACTGTTGGCTACAAAGTTGGCCTTCCAAGGTTTCAACACACTCATGATTCTTTGAATTAA 1032 0.4671 MNNLESYPPILRHVSHPRHHSPDGGDAIHEEEPDPLPVIDLECLTHDETKTKKAFEEACKHWGLFRLVNHGVPSTLFSQLQHQAKQLFSLSFESKQASCSGSNPVTYFWGTPALTPSGTVLTTAPQNINWVEGFNMPLPHLSQFQSQLPQLHSFRDSVVEYGEHMSRIGRRLFEAMAKNLDLNIEASSSSSYVAENSGIMRIYRYPNCSNSDVGLGMEVHTDSSVVSILSQENEVSGLELLKDHQWLTVKPISNTLIVNLGDMMQAISDDRYKSVTHRVKLNSERERISICYFVFPDEDLQIQSSKYKPFSYKQFRAKVQQDVKTVGYKVGLPRFQHTHDSLN* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2689 343 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 3-LIKE ISOFORM X1 22 331 - -
Pvu8g2689 343 MobiDBLite consensus disorder prediction 16 32 - -
Pvu8g2689 343 Pfam 2OG-Fe(II) oxygenase superfamily 202 296 IPR044861 -
Pvu8g2689 343 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 196 296 IPR005123 -
Pvu8g2689 343 PRINTS Isopenicillin N synthase signature 55 72 - -
Pvu8g2689 343 PRINTS Isopenicillin N synthase signature 256 282 - -
Pvu8g2689 343 MobiDBLite consensus disorder prediction 1 32 - -
Pvu8g2689 343 Pfam non-haem dioxygenase in morphine synthesis N-terminal 36 136 IPR026992 -
Pvu8g2689 343 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 22 331 - -
Pvu8g2689 343 SUPERFAMILY Clavaminate synthase-like 3 319 - -
Pvu8g2689 343 Gene3D - 2 325 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2689 Pvu-Chr8 57298899 57300869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2689 9 293 Glycosyltransferase AT5G59530 28.374 6.10e-33 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2689 - - gmx:100819244 450.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2689 8 57298899 57300869 Pvu8g2689 8 57298899 57300869 ECH